Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2416 ATGGGCTCGTGTGGGAAATCAAGTATACTAGATGACGCCACAAGCGGGTCTGATATTGAGAATCACTCATGCGCAGAGCTTCCATCGCAGTCTATTCCTGTGCAACGGTTAACTTGCAATGCGTTGGATTCTAACGTCGGGCATTCCAATACCATGGAGGGAAGCATGAATTCGTCTAAAGAGGCCCACACTGGGTCTGCCAGCACTATTGACGTTCCGGAGATGTCTGGAGATTCGTTGTTGATGGTGAACAAAAATGAAAATGCTGATAGGTTACAATGCTCATGTGCAGTAGTAACTTGCAATGCGGTGGACTCTAATGTCTTGCAGTCCAATATGATGAAGGAGGGTTGTATGGATTCATCTGAAGAGGTCCACACTGAGTCTTCAAGCTCCATTGATGTTCCAGAGATGTCAAGAGATTCATTGTTGATGGCGGACAAAAGTGAAAATACTGATAGTTTACGACAGTCCAGTCCAGTAGTTACTAGCTATGTGTTGGGCTCTAACTTCGGGCACTCCAATACGACGGAGGGTTTTATGGATTCGTTTGGGGAGGCCTGCACTGGGTCTGCAAGCCCTGATGATGTTATGGAGGTGCCCAAAGATTCATTGTTGATGGTGAATGAAAATGAAAAAACTGATATGTTGCAACAGTCCTGTCCAGTAGTAACTTGCAATGTGTTGGACTCTAATGTTGATCACTCCGATATGATGGAAGGTTGTACAAATTTGCCTAGAGAGGGGAACTCTGGGTCTGCAAGCCCCATTGATGCTCCAGAGGTAATCAGAGATCCATTGTTGATGGAGAACAAAACTGAAAATACTGATATTTTACAACAGTCCTGTCTAGTAGTAACTTACAATGTGTTGGACTCTAATGTTGAGCGCTCTGACATGACGGAAGGTTGTACGAATTCATCTAAAGGGGTCCATACTGGATCTGAAGACCCTATTGATGATCCAGAGATGTCCGAGGATTCATTGTTGATGGTGAATGAAAGTGAAAATACTGAGATGTCACTTCTGGAGAAAACCTCAGAGAGTGATAGGCAGACTCATCCAAGTATATTTTGTGCGCAAACTAAACTTTCTAATCTTGAAAGTGTCAGGTTGGTCTCAGAAGAAAAACCTCTTGTCAAAGATTGCCTCAAAATGCCATCAGACTTCATATCGACCACTGGTTCACCTAAGGGTTGTGTTAATCAGTATGGGTACAAGGATGGGAAGAACAACATATTCCACTCTGCAGGAGTTTCTTTAGCACTCATGGAAGGCGAAAATGATGCTGGTTTTCCAGCTGGCTTCCTAGTTTATTGCCACCAACAAAGTGAACAAGAGAATACAATGACGAGTGGTAATCCACTTTTGGAGGGTGTGAATGAAGGTGATTTGAACTGTGGGATTGAAGCAGATGCATGCAAGCAGACTCATTCACAAGGAGGTGAAGAACCCACAGATGTAATATGTACGGAAGGGGAGGCCATAAGTGATCAGCAGCATGATCAGAAAGATGGTGGTGATGAGAATAGTCCATATGAAGACTATGTTGATAAAGAAGGTATGCCTGATACGCATGTCCAAGTATTTTCCTCACCAGGTCATCAAAGGATCTCAGGGAGTTTGCCTGTAGCGTATTCCCCATCTGAGGCTACCCGCTCAGAGAAGGGGACTGATGATATTGATACTAATTTTGGTTCAGAAGATGTTGTGAAAGTTAAGGAAAACAATAATGATGTTATGACTGAAATAAATGTTGAAATGAAGAACAGTATGCCACAAGATGATAACGCACGTAAGTTAAATGACAGCTCCTCAAAAACGGATGCCAACTGTACCTTGAGAAAAACGTTTCCTCCTGAATCAGATCTTCCTTCTGTTGGTTATATTAGTATTGGCTCTCCAGAGGATGCGCCTGATATTCTCAAGGAGGTCAATGGTTCCGTCAGTCACTGTGGGCTTGTGGACGATTCTGGAGCGGACAGTATTAGGAAAGATATTATACAAGTTGATTGTATCTCTGAAAGCAACTATTCTGGGAATGCATCCTTGCCTGTTCGAAGGAATGATCGAAGAAGTAAATCTGGTCATAAGACTCAGACCAAAAGGGCTTCTAGGAAATGCAAGAACAAAATGAGTGTGCCATTCCTAGGTGGGGATATGAAGTTAATGTTGGAGGCTGCTAGAAAGAAAAGAAGCTGTTTCTCTAAACCAGCTCGTTCTTCTATCTGGGGATTGGTAGGAAACATTAATAAGTTTTTTGAACAAGAAAATGAGCTTGGAGTTGATGAAGTTATGTGTCAAGGATTGGGGAGGGTGAGAGGTGCCCGTAAAAGTGGCATTAGAAACAAGAATGGTGCATTCTCTAGCTCATTGAGTTCAATGAAGAAATGTGTTGCTCCAACTACTCGTGTTCGTCTGAAGATTAAGATGGGGAAAGAAGTCCATTTAAGTTGTTCAGATGTCTTGGTTTCAGAGGTTATGGGCATTGCATGTTCTGCTTCTAATGTGGCTCCTGGTCCAGGCTTTCAGGAAAGAAACGGCGGTGCTGGAGAGAAATGTTCAGAAGAGGTTGCGGTAGGCAAGTCTGAGTCTTTAACAAGCAATTTGGATGAGGATGCTCATGTTCTGAATGGACAAATGGAAAATCACCACTTAGAAGCTGCTGCAACAACAGCAAAGTCAGATGAGGTCTCGGAGGAAGTATGCCCAGAGAGGATGAATGAACCGTTGAGAGATACAGTTAATGACAAGGGGATGGATCCTGGAACTTCACCTGATTCAGAAGTTATCAATTCAATTCCTGAAGTCCAGGTTGGAGAAAGACATCAACAAGGTTTGCATGATGCTATTCTTGGTTCTTCTAAAGTGTCTGATTCTCTTGGAGGGACAGGTTGCAGGAGAAAGAAGAAAAAAGACAAACTTACTTCTTCAAGTAGTTCTGTTGTTGAAGATGGCTCAAAAGGGCCACCAAGGAAAAACAAAACTAAGCACTCAAAGAATCATGGACGTAAAAAGAATTCTAATAATGTGGTTTGCTCCATGAGTTTGCATACTTCCACTGGTATAAATGTCGTGAACTACTCAGCAAACCATGAACTATCTGGTGAATCATTGCCCCCATCTGGAGGGAATGGAGAGATTGAACTTGAAGACCCCTCTGGGTCTTCGAAAGTCAAAAGTAGCATGAAAGTTGAGACTACTTGTAGCCCAGATGACAATTATGAGCTTTTAGAATCCCAGGGGAATGATAGTTTGCTGTCATCAGCTAGATCGTCAGGTCGTAAACTTCCTAAAAGTCTTACATCTTGTAAAATCACCCCCGAATCAAAAACTTCAGACTCAATGAGCAGGAAAAAGACTGGCAGCAGACGCAGGGAGAAACAACTGAAACCTATTAAGAAGAGTGAAGCCGAGGGAAAAGCTGTCTCTGTAAAAGTTATCTCCGAAGTAGAAGATTGTCTACACGCAGAACATGGTGGAAGTTATAAATTGGATGATATTGGAAAAATTAATGCTGATGACAACAAAGTATCAGTAAACGGATCCAATTTGGACATGGTAGTTGGTACTGGTTCGGAAGAGCAGCGTTCATCACCTCATAATGCGTGGGTACGGTGCGATGATTGTCACAAGTGGCGGCGTATTCCTGTTGAGCTTGCAGATCTAATTGAAGAAACAAAGTGCACCTGGACCTGTAAGGATAGCAATGATAAAGCCTTTTCTGATTGCTCTATTCCCCAAGAAAAGTCAAATATAGAGATCAACGCAGAGTTGGGGTTATCAGACGCATCTGGTGAAGAAGATGCTTATGAAGGCTGTAAAAATTATAAGAAGTTGGAATATCAACACCCAACAGTTCACCAGGAGTCAACTTTTACCCACATCCACTCTAATGAGTTTCTGCACCGCAGCCGCAAAACGCAGACTATTGATGAGATAATGGTTTGCCATTGTAAACCACCGTCACAAAGTAGGTTTGGTTGTGGGGATGAATGCCTAAATCGGATGCTCAACATTGAATGTGTTCAAGGAACCTGCCCGTGTGGGGATTTTTGTTCAAATCAACAGTTCCAGCAACGCAAGTATGCAAGCTTGACGTGGTTTAAATGTGGGAAAAAAGGTTATGGGTTGAAGGCAATTGAGGATATATCTAAAGGGAAGTTTCTTATTGAATATGTTGGGGAGGTGCTTGATATGCATGCTTATGAGGCACGGCAAAGAGAGTATGCTTTCAAGGGTCATCGACATTTCTACTTCATGACTTTGAATGGCAGTGAGGTGATAGATGCAAGTGCAAAAGGAAACTTGGGACGTTTCATTAATCATAGTTGTGATCCTAATTGCCGTACGGAAAAGTGGATGGTGAATGGTGAAATCTGTATTGGACTTTTTGCGTTGAGGGATATAAAGCAGGGTGAAGAGGTGACATTTGATTACAACTATGTAAGGGTTTTTGGTGCTGCTGCCAAAAAATGTTATTGTGGTTCACCTCTATGTCGTGGTTATATAGGTGGTGGTGATCCACATAATGCTGAAGTTATTGTTCAAGGTGATTCAGATGACGAATTTCCAGAACCAGTTATGCTTACTGAAGATGGTGAAATTGAAAGCAGTATGCCTAGATCTGATGTTGTTGTGAAGGCTGAAAGGAACTTGTCAAGAGACAGAGATCTAGGTGACAAGTCCAGAAGTGCTCAAGTGCCAGGCAATAATCAGGATAAAGAGAACTCTGTAAATCCATCTCCTGCTACTCCCCTGTTGCACTTCCCATTAGATGTGGAAGATTCAGTGGGCAGATTGCCATCATCTGATGTGGAAGAAATTTCTCAACAAATGGGGGATGCAATTAGTAGATCCATGCCTGCTGTACACCAACAACCTGTGTTGAAATCAGAGCTTCCTGACAATATTTCTTCCATCCGAAGAGTGGAGGCTTCTGCTACACCTATTAGTAAAGTGATATCAAATTTCACCAAGAATAAAAGGGAGTCCAAGTCTGAAATAGTTGAAGATAGGCCTGGTTTTGTAAAAACCCATCTGCTTGTGAAGACTTCTCGAGCAAATGGTTCAATTAAAAAGGGAAAGGTTCATGCTAATCATTCAAATGGCCTCAAAGCTGCAGTGACAACCAATAGATTGCAGGCTGCACCAGTCAAACCTAAAAAGGTGGTGGAGGGTTCTTCCAATGGCCGTTTTGAAGCAGTTCAGGAGAAACTTAAGGAGTTGTTGGATGAAGATGGAGAAGGAGGAATAAGCAAAAGAAAAGACGCAACCAAAGGTTACTTAAAGCTTCTGCTTCTCACTGTGGCATCTGATGATAGGAATAATGGCGAGGCTATTCAAAGCAATCGAGATCTTTCCATGATCCTTGGTGCCCTTCTGAAAACAAAATCTAGAGCAGTGCTGAATGATATAATTAACAAGAATGGCCTACAGATGTTGCATAACATTTTGAAGCAGTACAGACGAGATTTCAAGAAAACTCCCATACTAAGGAAGCTTCTTAAGGTCTTAGAGTATCTAGCAGCAAGCAAGATTTTGACATTTGAACACATTAATGGCGGCCCCCCCTGCCATGGAATGGAGAGTTTTAGGGAGTCCATGTTGTCTCTGACGGAGCATGATGACAAACAGGTCCATCAAATTGCTCGAAGCTTCCGCGACAGATGGATTCGTAAACCCTTCAGAAGACATGGATATGTGGATCGAGACGATTTTAAGGGAGAATTTCATAGGAATTCAAACAGCAATAGATTTTCAGCATCACAGAACCATAGGCGGGAGCTAGATGTTAGATCCACGGAAGCAATTGACTGTGTCCAGCAATCAAAGCTTGTGACAACTTCGGTAGATGCTGGTACCCAGGGGGGCTGCTCAGCACCATCTTTAGATGGGGGTAACGTTGATGGTACAAAAAGGCGTAAGCGTAAAAGCAGATGGGATCAACCTGCAGAGACGACAACAAATTTATCATCTAGTCCATGTAAGAAACAAAATGTTGATTCTGGACTATCGGTGCATGCTGATGCAGCTATTGACTCTTTTGATCGAAGTCAGAACATGAATGAGGATTTCCCCCCTGGTTTTTCATGTCCTGTTCAACCCCAATTTTGTTCTTCGAATGCTTCGCCTCACCCTGTTGATCTTGCTTTGCAAAATGGGGGCAATATTGGGTGCCCCCCAGATACAGTAGTTGGACATCCAAAGAGGAAATTTAATTCTCGCACGCCTGTCTCATATGGAATGCCATTATCTTTTGTCCAGCAGTTTGGCACACCTCATGCTGAAATATCAGGAAGTTGGATCACTGCACCAGGTGTGCCTTTCAGCCCATTTCCTCCATTGCCCTCCTATCCACAGGATAATAAAGACTGTCAACCTTCTAGTTCTACCGATGCCGCAGCTGTAGATCAGCCTGTTGAAATTCAGCAACGGGATATGAACGGTCCAGTGGGCTGTTACTCTGATGATATTGCTTCCAGCACAACTGATACTAGCCCTAAAGACATTGACCTTGCGCATGAAGATGATAATCAACTTTGTAAACGTTTGAAAGGCTCCTCTTGTGATTTGGGAAGGAAGTACTTTAGGCAGCAAAAATGGAATAATTCAAAAATACATCGACCCTGGTTTAGGAGGAATGCGTGGGGATCATCTAATGGGAACTACACTGCTGGAGGTACATGCAGTGTAAGTGTGGATGAACCAAGTGAGTCAAAACTTACTAATTCTTCGGAGGATGTAATCTGTAGAACGGAGGAGGGTGACAATAATGTTTAA 6783 0.4271 MGSCGKSSILDDATSGSDIENHSCAELPSQSIPVQRLTCNALDSNVGHSNTMEGSMNSSKEAHTGSASTIDVPEMSGDSLLMVNKNENADRLQCSCAVVTCNAVDSNVLQSNMMKEGCMDSSEEVHTESSSSIDVPEMSRDSLLMADKSENTDSLRQSSPVVTSYVLGSNFGHSNTTEGFMDSFGEACTGSASPDDVMEVPKDSLLMVNENEKTDMLQQSCPVVTCNVLDSNVDHSDMMEGCTNLPREGNSGSASPIDAPEVIRDPLLMENKTENTDILQQSCLVVTYNVLDSNVERSDMTEGCTNSSKGVHTGSEDPIDDPEMSEDSLLMVNESENTEMSLLEKTSESDRQTHPSIFCAQTKLSNLESVRLVSEEKPLVKDCLKMPSDFISTTGSPKGCVNQYGYKDGKNNIFHSAGVSLALMEGENDAGFPAGFLVYCHQQSEQENTMTSGNPLLEGVNEGDLNCGIEADACKQTHSQGGEEPTDVICTEGEAISDQQHDQKDGGDENSPYEDYVDKEGMPDTHVQVFSSPGHQRISGSLPVAYSPSEATRSEKGTDDIDTNFGSEDVVKVKENNNDVMTEINVEMKNSMPQDDNARKLNDSSSKTDANCTLRKTFPPESDLPSVGYISIGSPEDAPDILKEVNGSVSHCGLVDDSGADSIRKDIIQVDCISESNYSGNASLPVRRNDRRSKSGHKTQTKRASRKCKNKMSVPFLGGDMKLMLEAARKKRSCFSKPARSSIWGLVGNINKFFEQENELGVDEVMCQGLGRVRGARKSGIRNKNGAFSSSLSSMKKCVAPTTRVRLKIKMGKEVHLSCSDVLVSEVMGIACSASNVAPGPGFQERNGGAGEKCSEEVAVGKSESLTSNLDEDAHVLNGQMENHHLEAAATTAKSDEVSEEVCPERMNEPLRDTVNDKGMDPGTSPDSEVINSIPEVQVGERHQQGLHDAILGSSKVSDSLGGTGCRRKKKKDKLTSSSSSVVEDGSKGPPRKNKTKHSKNHGRKKNSNNVVCSMSLHTSTGINVVNYSANHELSGESLPPSGGNGEIELEDPSGSSKVKSSMKVETTCSPDDNYELLESQGNDSLLSSARSSGRKLPKSLTSCKITPESKTSDSMSRKKTGSRRREKQLKPIKKSEAEGKAVSVKVISEVEDCLHAEHGGSYKLDDIGKINADDNKVSVNGSNLDMVVGTGSEEQRSSPHNAWVRCDDCHKWRRIPVELADLIEETKCTWTCKDSNDKAFSDCSIPQEKSNIEINAELGLSDASGEEDAYEGCKNYKKLEYQHPTVHQESTFTHIHSNEFLHRSRKTQTIDEIMVCHCKPPSQSRFGCGDECLNRMLNIECVQGTCPCGDFCSNQQFQQRKYASLTWFKCGKKGYGLKAIEDISKGKFLIEYVGEVLDMHAYEARQREYAFKGHRHFYFMTLNGSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRDIKQGEEVTFDYNYVRVFGAAAKKCYCGSPLCRGYIGGGDPHNAEVIVQGDSDDEFPEPVMLTEDGEIESSMPRSDVVVKAERNLSRDRDLGDKSRSAQVPGNNQDKENSVNPSPATPLLHFPLDVEDSVGRLPSSDVEEISQQMGDAISRSMPAVHQQPVLKSELPDNISSIRRVEASATPISKVISNFTKNKRESKSEIVEDRPGFVKTHLLVKTSRANGSIKKGKVHANHSNGLKAAVTTNRLQAAPVKPKKVVEGSSNGRFEAVQEKLKELLDEDGEGGISKRKDATKGYLKLLLLTVASDDRNNGEAIQSNRDLSMILGALLKTKSRAVLNDIINKNGLQMLHNILKQYRRDFKKTPILRKLLKVLEYLAASKILTFEHINGGPPCHGMESFRESMLSLTEHDDKQVHQIARSFRDRWIRKPFRRHGYVDRDDFKGEFHRNSNSNRFSASQNHRRELDVRSTEAIDCVQQSKLVTTSVDAGTQGGCSAPSLDGGNVDGTKRRKRKSRWDQPAETTTNLSSSPCKKQNVDSGLSVHADAAIDSFDRSQNMNEDFPPGFSCPVQPQFCSSNASPHPVDLALQNGGNIGCPPDTVVGHPKRKFNSRTPVSYGMPLSFVQQFGTPHAEISGSWITAPGVPFSPFPPLPSYPQDNKDCQPSSSTDAAAVDQPVEIQQRDMNGPVGCYSDDIASSTTDTSPKDIDLAHEDDNQLCKRLKGSSCDLGRKYFRQQKWNNSKIHRPWFRRNAWGSSNGNYTAGGTCSVSVDEPSESKLTNSSEDVICRTEEGDNNV 2260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2416 2260 MobiDBLite consensus disorder prediction 681 708 - -
Mibi08g2416 2260 Gene3D - 1193 1257 - -
Mibi08g2416 2260 ProSiteProfiles AWS domain profile. 1312 1362 IPR006560 GO:0005634|GO:0018024
Mibi08g2416 2260 MobiDBLite consensus disorder prediction 950 1011 - -
Mibi08g2416 2260 ProSiteProfiles Zinc finger CW-type profile. 1198 1252 IPR011124 GO:0008270
Mibi08g2416 2260 MobiDBLite consensus disorder prediction 2231 2247 - -
Mibi08g2416 2260 PANTHER SET DOMAIN PROTEINS 706 1987 - -
Mibi08g2416 2260 MobiDBLite consensus disorder prediction 299 323 - -
Mibi08g2416 2260 MobiDBLite consensus disorder prediction 890 930 - -
Mibi08g2416 2260 MobiDBLite consensus disorder prediction 299 313 - -
Mibi08g2416 2260 SMART PostSET_3 1489 1505 IPR003616 -
Mibi08g2416 2260 Pfam CW-type Zinc Finger 1204 1250 IPR011124 GO:0008270
Mibi08g2416 2260 MobiDBLite consensus disorder prediction 691 708 - -
Mibi08g2416 2260 MobiDBLite consensus disorder prediction 2231 2260 - -
Mibi08g2416 2260 MobiDBLite consensus disorder prediction 1969 1983 - -
Mibi08g2416 2260 FunFam Histone-lysine N-methyltransferase 1263 1520 - -
Mibi08g2416 2260 MobiDBLite consensus disorder prediction 898 916 - -
Mibi08g2416 2260 MobiDBLite consensus disorder prediction 48 73 - -
Mibi08g2416 2260 MobiDBLite consensus disorder prediction 1952 2003 - -
Mibi08g2416 2260 FunFam Histone-lysine N-methyltransferase 1196 1257 - -
Mibi08g2416 2260 MobiDBLite consensus disorder prediction 592 618 - -
Mibi08g2416 2260 Pfam SET domain 1375 1481 IPR001214 GO:0005515
Mibi08g2416 2260 Pfam AWS domain 1327 1361 IPR006560 GO:0005634|GO:0018024
Mibi08g2416 2260 SUPERFAMILY SET domain 1291 1502 IPR046341 -
Mibi08g2416 2260 CDD SET_SETD2 1363 1505 IPR044437 GO:0010452|GO:0046975
Mibi08g2416 2260 MobiDBLite consensus disorder prediction 1565 1584 - -
Mibi08g2416 2260 MobiDBLite consensus disorder prediction 1984 2001 - -
Mibi08g2416 2260 MobiDBLite consensus disorder prediction 2113 2172 - -
Mibi08g2416 2260 MobiDBLite consensus disorder prediction 1034 1139 - -
Mibi08g2416 2260 Gene3D SET domain 1259 1516 IPR046341 -
Mibi08g2416 2260 ProSiteProfiles SET domain profile. 1356 1481 IPR001214 GO:0005515
Mibi08g2416 2260 MobiDBLite consensus disorder prediction 531 552 - -
Mibi08g2416 2260 MobiDBLite consensus disorder prediction 1519 1588 - -
Mibi08g2416 2260 MobiDBLite consensus disorder prediction 1055 1111 - -
Mibi08g2416 2260 MobiDBLite consensus disorder prediction 1548 1563 - -
Mibi08g2416 2260 SMART shorttest3 1312 1363 IPR006560 GO:0005634|GO:0018024
Mibi08g2416 2260 MobiDBLite consensus disorder prediction 2122 2138 - -
Mibi08g2416 2260 MobiDBLite consensus disorder prediction 531 564 - -
Mibi08g2416 2260 ProSiteProfiles Post-SET domain profile. 1489 1505 IPR003616 -
Mibi08g2416 2260 MobiDBLite consensus disorder prediction 497 519 - -
Mibi08g2416 2260 SMART set_7 1364 1487 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2416 Mibi-ChrMibi08 41910083 41925213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2416 1347 1504 C2H2 Transcription Factor Family AT2G23740 33.702 9.33e-20 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mibi08g2416 SET 1.5e-19 No_clan