Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2406 ATGGAAAAGCAACACGAGAAAGATATTGAAGCAGCGATCTCATCAAGGGTCGTTGAAGTTGTAAGCAATCGTATAGCACCAGCACCTGATGTTGATGCTGCTTTCTCCACTCACAAGAAATCTAGGTGGGGGGACTTTCTATCCTATGTAGGTCCTGGCTTTCTAGTTTCCATGGCTTACCTTGATCCTGGAAACTTGGAAACTGACATGCAAGCTGGAGCCAACTACGGATATGAGCTGCTATGGGTAATACTGATTGGGTTATTTTTTGCTCTCATTATCCAATCCTTAGCGGCAAATCTTGGTGTAACCACAGGGAAGCACCTTTCAGAATTATGTAAATTGGAGTACCCATTACTAGTGAAGTACTGCTTATGGGTGCTGGCAGAGATTTCTGTCATAGCTGCAGATATAGCCGAAGTTATTGGCACAGCCATTGCACTCAAGATACTGTTTCACATCCCACTATGGGCAGGAGTTATCTTGACCGGCTTCTCCACTCTTTTGCTTCTTGGTCTCCAGAGATTTGGCGTTAGGAAGCTGGAATTGCTAGTATCAACTCTAGTATTTATAATGGCAGGATGCTTCTTTGTAGAAATGAGCTACGTAAAACCACCACCTTCTGATGTACTGAAGGGAATGTTTGTGCCAAAACTTGACGGCCATGGGGCCACTGCTGACGCAATTGCCCTTTTCGGAGCACTCATTATGCCGCACAACCTCTTTCTTCATTCTGCTCTTGTTCTCTCTAGAAATGTACCCACCTCAGTCCGTGGCATCAACGACGCATGCAGATTCTTTCTTATAGAAAGTGGGTTTGCTCTGTTTGTAGCATTTCTAATAAACGTAGCAATAGTTTCAGTATCAGGCACAGTATGCTCAGGAATTAATCTTTCAGCTCAAGACATGGAAAGATGCAGCGATCTCTCCCTTGATTCTGCCTCTTTTCTTCTTAAGAATGTTTTGGGAAAGTCCAGCTCAACATTTTATGCCATAGCACTTCTGGCCTCTGGACAAAGCTCCACTATCACTGGCACCTATGCAGGACAGTACATCATGCAGGGATTCTTGGAATTGAGGATGAAACAATGGATACGGAATTTGATGACAAGGAGTGTTGCCATAGTACCTAGTCTTGCTGTTGTTCTTATTGGCGGATCTTCGGGTGCAAGCCGCCTTATCATCATTGCTTCGATGATACTTTCATTTGAGCTGCCATTTGCTTTGATTCCACTGCTCAAGTTTAGCAGCAGCAGCCCCAAGATGGGACCTCACAAGAATTCTATAGTTGTCATTGTGATTTCATGGATCCTAGGACTGGGAATCATTGGTATCAACGTGTACTATCTAAGCACAGGTTTTGTGAATTGGTTAATTCACAGCAGTCTTCCAAAAATTGCAACTATATTCATTGGGATCATAGTATTTCCTCTTATGGCCATTTATATTGCTTCCGTTATCTACCTCACCTTCAGAAAAGACACTGTCAATACCTTCATAGACACTCAGGACAATTCTCTGGAGTCAACCCATTTGGAATTGCGTCCAATTCCTTTCAGAGAAGATTTAAGGGACATCCAACTTCCAGATTAG 1593 0.4319 MEKQHEKDIEAAISSRVVEVVSNRIAPAPDVDAAFSTHKKSRWGDFLSYVGPGFLVSMAYLDPGNLETDMQAGANYGYELLWVILIGLFFALIIQSLAANLGVTTGKHLSELCKLEYPLLVKYCLWVLAEISVIAADIAEVIGTAIALKILFHIPLWAGVILTGFSTLLLLGLQRFGVRKLELLVSTLVFIMAGCFFVEMSYVKPPPSDVLKGMFVPKLDGHGATADAIALFGALIMPHNLFLHSALVLSRNVPTSVRGINDACRFFLIESGFALFVAFLINVAIVSVSGTVCSGINLSAQDMERCSDLSLDSASFLLKNVLGKSSSTFYAIALLASGQSSTITGTYAGQYIMQGFLELRMKQWIRNLMTRSVAIVPSLAVVLIGGSSGASRLIIIASMILSFELPFALIPLLKFSSSSPKMGPHKNSIVVIVISWILGLGIIGINVYYLSTGFVNWLIHSSLPKIATIFIGIIVFPLMAIYIASVIYLTFRKDTVNTFIDTQDNSLESTHLELRPIPFREDLRDIQLPD 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2406 530 PRINTS Natural resistance-associated macrophage protein signature 153 172 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi08g2406 530 PRINTS Natural resistance-associated macrophage protein signature 125 151 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi08g2406 530 PRINTS Natural resistance-associated macrophage protein signature 366 383 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi08g2406 530 PRINTS Natural resistance-associated macrophage protein signature 338 357 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi08g2406 530 PRINTS Natural resistance-associated macrophage protein signature 228 251 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi08g2406 530 PRINTS Natural resistance-associated macrophage protein signature 398 417 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi08g2406 530 PRINTS Natural resistance-associated macrophage protein signature 178 199 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi08g2406 530 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 46 420 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi08g2406 530 Hamap Divalent metal cation transporter MntH [mntH]. 32 454 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi08g2406 530 Pfam Natural resistance-associated macrophage protein 67 428 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mibi08g2406 530 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 37 496 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2406 Mibi-ChrMibi08 41832116 41835610 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2406 22 530 Inorganic Solute Cotransporters AT1G15960 58.607 0.0 618