Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2400 ATGGCATCCGCAGATCTACAGTTGCCACCCGGCTTCCGATTCCATCCGACGGATGAGGAGCTGGTGATGCACTACCTCTGTCGTAAATGTGCATCGCATCAGATTGCTGTCCCGATTATTGCTGAAATAGATCTTTACAAGTACGATCCTTGGGACCTTCCTGGCCTGGCTTTGTATGGGGAGAAGGAGTGGTATTTCTTCTCGCCGAGAGACCGGAAATATCCGAACGGTTCGAGGCCGAACCGGGCGGCTGGGACCGGCTACTGGAAGGCAACCGGAGCCGATAAGCCAATCGGGCATCCAAAACCGGTTGGGATTAAGAAAGCTTTGGTGTTTTACGCCGGGAAAGCACCCAAAGGCGAGAAAACCAATTGGATCATGCATGAGTATCGCCTCGCAGATGTGGATCGCTCCGCTCGCAAAAAGAATAGCTTGAGGCTTGATGATTGGGTGCTTTGCCGTATCTACAACAAGAAAGGAGCCATCGAGAAGCAACCGAGTCCAATGAGTCAGATAACAGCCGAGTCATCAGAAATCGAGGACCAGAAGCCTCTGCATTTGACACGTGGCGGCGCACTCCCTCCGCCGCCGCCGCCGGCTCATCCGCCGACGGCGGGAACCGATTACGTGTATTTCGACAATTCCGATTCGATTCCGAAGCTTCATACGGATTCGAGCTGTTCGGAACAAGTGGTGTCGCCCGAGTTCGCTAGCGAGGTACAGAGCGAGCCAAAGTGGAATGAGTGGGAGAAGAACCTTGATTTTTCGTATAATTACGTGGATGCCACTCTGGGGAATAACGGTTTTGGATCGCAGTTTCAGGGCGGCGGTCAGATGTCGCCGTTGCAGGATATGTTCATGTACCTGCAGAAGCCCTTCTGA 882 0.5317 MASADLQLPPGFRFHPTDEELVMHYLCRKCASHQIAVPIIAEIDLYKYDPWDLPGLALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGHPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGAIEKQPSPMSQITAESSEIEDQKPLHLTRGGALPPPPPPAHPPTAGTDYVYFDNSDSIPKLHTDSSCSEQVVSPEFASEVQSEPKWNEWEKNLDFSYNYVDATLGNNGFGSQFQGGGQMSPLQDMFMYLQKPF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2400 293 PANTHER NAC TRANSCRIPTION FACTOR 56 8 214 - -
Mibi08g2400 293 FunFam NAC transcription factor 17 162 - -
Mibi08g2400 293 Gene3D NAC domain 17 162 IPR036093 GO:0003677|GO:0006355
Mibi08g2400 293 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
Mibi08g2400 293 Pfam No apical meristem (NAM) protein 9 132 IPR003441 GO:0003677|GO:0006355
Mibi08g2400 293 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
Mibi08g2400 293 MobiDBLite consensus disorder prediction 186 205 - -
Mibi08g2400 293 MobiDBLite consensus disorder prediction 190 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2400 Mibi-ChrMibi08 41755771 41757236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2400 6 293 NAC Transcription Factor Family AT1G01720 73.333 8.92e-153 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi08g2400 NAM 1.8e-38 No_clan