Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2396 ATGGCCGAGCGTGTGTCACTCACACTTTCAGCGCCTTTACCATCCCCTCCTCCTCCCCCAAGAATGGCCTCTTTTGGTGGCGGTGCCGCCGTCTACTCTCGCTTCCTCTCCTCCGCTTCCAGAGCCTCCCTCTCTCTCTCTTCTCCTTCTCCTTCTCCTTCCTTCAACGGCCTCAGATCCTTACCTCGCATTTCCCGTCTCTTCCTCCATCAGCGCAGGGCTGAGGTTCGTGTTTCGAGCGGACGATACAGCACCGTCTCTGCGTCCAAGTCGTTTGCATCTGATCCTGATCAGCTGAAGAGCGCTCGAGAGGATATTAAAGAGCTTCTCAGCTCTAAGTTCTGCCATCCAATACTGATTCGCTTGGGATGGCATGATGCTGGTACTTACAATAAGAATATTGAGGAGTGGCCTCAGAGAGGTGGAGCTAATGGTAGCCTGAGATTTGAAGTTGAGCTGAAACATGGAGCCAATGCTGGACTTGTAACTGCATTGAATCTTCTCAAGCCAATCAAAGACAAATACTCTGGTGTGACATATGCTGATTTATTTCAGTTGGCTAGTGCTACTGCTGTAGAGGAGGCTGGAGGCCCAAAAATCCCTATGAAGTATGGAAGAGTAGATGTCTCTGGACCTGAAGAATGCCCTGAAGAAGGGAGACTTCCTGATGCTGGCCCCCCTTCACCTGCTGACCATTTACGGCAAGTGTTCTACAGGATGGGATTAAATGACAAGGAAATAGTTGCATTATCTGGTGCGCACACACTGGGGAGGTCTCGACCAGAACGTAGTGGGTGGGGCAAGCCTGAGACTAAGTATACGAAAGAAGGGCCGGGAGCCCCTGGTGGGCAATCTTGGACCGTGCAGTGGTTGAAGTTTGATAATTCTTACTTCAAGGATATCAAAGAAAAAAAGGATGAGGATCTATTGGTCTTGCCAACTGATGCTGTTCTCTTTGAGGATCCATCATTCAAGGTCTATGCTGAAAAGTATGCTGCAGATCAGGAAGCATTCTTTAAAGATTATGCTGAAGCCCATGCCAAACTCAGTAACCTTGGAGCCAAATTTGATCCTCCAGAGGGCATTCCAATTAGTCGGCTGGAAAAGGAGTGA 1113 0.4915 MAERVSLTLSAPLPSPPPPPRMASFGGGAAVYSRFLSSASRASLSLSSPSPSPSFNGLRSLPRISRLFLHQRRAEVRVSSGRYSTVSASKSFASDPDQLKSAREDIKELLSSKFCHPILIRLGWHDAGTYNKNIEEWPQRGGANGSLRFEVELKHGANAGLVTALNLLKPIKDKYSGVTYADLFQLASATAVEEAGGPKIPMKYGRVDVSGPEECPEEGRLPDAGPPSPADHLRQVFYRMGLNDKEIVALSGAHTLGRSRPERSGWGKPETKYTKEGPGAPGGQSWTVQWLKFDNSYFKDIKEKKDEDLLVLPTDAVLFEDPSFKVYAEKYAADQEAFFKDYAEAHAKLSNLGAKFDPPEGIPISRLEKE 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2396 370 SUPERFAMILY Heme-dependent peroxidases 96 355 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mibi08g2396 370 FunFam L-ascorbate peroxidase S chloroplastic/mitochondrial 102 226 - -
Mibi08g2396 370 ProSiteProfiles Plant heme peroxidase family profile. 178 370 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi08g2396 370 PRINTS Plant ascorbate peroxidase signature 177 195 IPR002207 GO:0004601|GO:0006979|GO:0020037
Mibi08g2396 370 PRINTS Plant ascorbate peroxidase signature 95 115 IPR002207 GO:0004601|GO:0006979|GO:0020037
Mibi08g2396 370 PRINTS Plant ascorbate peroxidase signature 116 131 IPR002207 GO:0004601|GO:0006979|GO:0020037
Mibi08g2396 370 PRINTS Plant ascorbate peroxidase signature 196 208 IPR002207 GO:0004601|GO:0006979|GO:0020037
Mibi08g2396 370 PRINTS Plant ascorbate peroxidase signature 315 339 IPR002207 GO:0004601|GO:0006979|GO:0020037
Mibi08g2396 370 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 86 356 IPR044831 GO:0004601|GO:0034599
Mibi08g2396 370 Gene3D - 102 355 - -
Mibi08g2396 370 Pfam Peroxidase 104 334 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi08g2396 370 MobiDBLite consensus disorder prediction 1 24 - -
Mibi08g2396 370 FunFam L-ascorbate peroxidase T, chloroplastic 224 347 - -
Mibi08g2396 370 MobiDBLite consensus disorder prediction 211 230 - -
Mibi08g2396 370 ProSitePatterns Peroxidases proximal heme-ligand signature. 246 256 IPR019793 -
Mibi08g2396 370 PRINTS Haem peroxidase superfamily signature 286 301 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi08g2396 370 PRINTS Haem peroxidase superfamily signature 196 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi08g2396 370 PRINTS Haem peroxidase superfamily signature 178 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi08g2396 370 PRINTS Haem peroxidase superfamily signature 116 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi08g2396 370 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mibi08g2396 370 MobiDBLite consensus disorder prediction 253 281 - -
Mibi08g2396 370 CDD ascorbate_peroxidase 87 357 - -
Mibi08g2396 370 Gene3D Peroxidase, domain 2 224 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2396 Mibi-ChrMibi08 41712809 41716582 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2396 178 355 Peroxidase AT4G17690 33.498 1.05e-18 84.3