Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2392 ATGGAGACAGAGAGGATGGCGACTATAACGGAGAATCCCTTGGCGCTGAGAATGAAGATGGAGGTTGAGGATATTATTGATGATGAGGCGCAGGAGGAACAAGATCTGAAACATTTCCATGTCTTAACAGCCATGGATGATGATGATGATGATGATGATGAGGAAAGTAGTACTATTAAGCTGCAGAAGGAAGTAGGAGAGGATGTGCAACATCATTTCCATGTCTTAGCCGTCGACGATAGTCTTATTGACCGCAAACTTCTCGAGAAGCTCCTTCACGTCTCTTCTCGCAAATGCAAAGTGACTTGTGTGGACTCCGGCGACAAGGCTTTGAAATATCTTGGTCTTGTTGATGATCTTGATAATGTTTCTTCCATTTCTTCAGAATCCTCACCTTCTTCTCCCCAGTCGCCCCAAGTACTACGAGAGGCAGTGAATGTGAATTTGATCATGACAGACTACTGCATGCCAGGGATGAGTGGCTATGATTTACTTAGACGAGTCAAGGGATCTTCTTGGAAGCACGTACCAGTGGTGATCATGTCATCAGAGAATGTACCATCCAGAATTAACATGTGCTTGGAAGGAGGAGCAGATGAGTTTCTACTGAAGCCACTGAGGTTATCAGACGTGAAGAAACTTCAACCGTACATTGTGGGATCCTCATCCCTGGAAAACAACAACAACAACAACAACAACAATTCATCATCAAGCGAACAAGAATCTGGTAACAGTGATTTAGCAACCGACAATGACTGCAATCCCAACAGTAATAACAACGCTTGCTTCTGCTTCACCAAAAGGAAGGCCATGTCTCCTCAGCCTTCTGACAGATCCAGACCCAAATTCAAATAA 855 0.4409 METERMATITENPLALRMKMEVEDIIDDEAQEEQDLKHFHVLTAMDDDDDDDDEESSTIKLQKEVGEDVQHHFHVLAVDDSLIDRKLLEKLLHVSSRKCKVTCVDSGDKALKYLGLVDDLDNVSSISSESSPSSPQSPQVLREAVNVNLIMTDYCMPGMSGYDLLRRVKGSSWKHVPVVIMSSENVPSRINMCLEGGADEFLLKPLRLSDVKKLQPYIVGSSSLENNNNNNNNNSSSSEQESGNSDLATDNDCNPNSNNNACFCFTKRKAMSPQPSDRSRPKFK 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2392 284 MobiDBLite consensus disorder prediction 221 252 - -
Mibi08g2392 284 Pfam Response regulator receiver domain 75 212 IPR001789 GO:0000160
Mibi08g2392 284 ProSiteProfiles Response regulatory domain profile. 74 219 IPR001789 GO:0000160
Mibi08g2392 284 CDD REC_typeA_ARR 75 214 - -
Mibi08g2392 284 Gene3D - 74 251 - -
Mibi08g2392 284 PANTHER TWO-COMPONENT RESPONSE REGULATOR 73 239 IPR045279 GO:0009736
Mibi08g2392 284 SMART REC_2 73 215 IPR001789 GO:0000160
Mibi08g2392 284 SUPERFAMILY CheY-like 73 214 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2392 Mibi-ChrMibi08 41667992 41670658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2392 65 221 Response Regulator Gene Family AT3G57040 55.063 5.81e-54 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi08g2392 Response_reg 2e-14 CL0304