Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2364 ATGGTGAAGAGAGAACAATGTGTATCAGAAGGTGGGAAGAAGAAGTACAAGGGAGTGAGAATGAGAAGCTGGGGATCATGGGTGTCAGAGATAAGAGCCCCTAACCAGAAGACAAGAATATGGCTGGGCTCTTATTCAACTCCTGAGGCTGCAGCCAGAGCCTATGATGCTGCACTTCTCTGCCTCAAAGGCTCCTCTGCTAATCTTAACTTCCCTTCTTCTTCTCACTTCAATATTCCTCAAGACACACTTTTGTCCCCTAAATCAATCCAAAAAGTAGCTGCAGCAGCTGCTGCTAATACTTGTGCTGATAATGCCAATACTTCTCCTCCTCCTTCCTCTTCATCAGTCTCATCTTCATCAATGGTTTCCTCTCCATCTGATCTAGTTGATGATGATGATGCTTCATTAATCTCATCCTTTAAGGCCTTGTCTGGATTTGATCGGCCCAATGAACCATTGGCTGAGATGATGGAACATTGGTACGGCCTTGAAGGGCTACAATCCCCCAAGTATGTTGATCAAATGCTGAGTGGTGCTTCTTTAGACTTTTACTCACACCAGCTGCTGAGTGATGATCTCTATGAAGAAAGCAACTTCAGTTTGTGGAGCTTCTGCTGA 621 0.4477 MVKREQCVSEGGKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLKGSSANLNFPSSSHFNIPQDTLLSPKSIQKVAAAAAANTCADNANTSPPPSSSSVSSSSMVSSPSDLVDDDDASLISSFKALSGFDRPNEPLAEMMEHWYGLEGLQSPKYVDQMLSGASLDFYSHQLLSDDLYEESNFSLWSFC 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2364 206 MobiDBLite consensus disorder prediction 103 127 - -
Mibi08g2364 206 CDD AP2 14 74 IPR001471 GO:0003700|GO:0006355
Mibi08g2364 206 PRINTS Ethylene responsive element binding protein signature 16 27 IPR001471 GO:0003700|GO:0006355
Mibi08g2364 206 PRINTS Ethylene responsive element binding protein signature 38 54 IPR001471 GO:0003700|GO:0006355
Mibi08g2364 206 MobiDBLite consensus disorder prediction 103 129 - -
Mibi08g2364 206 SMART rav1_2 15 78 IPR001471 GO:0003700|GO:0006355
Mibi08g2364 206 ProSiteProfiles AP2/ERF domain profile. 15 72 IPR001471 GO:0003700|GO:0006355
Mibi08g2364 206 Pfam AP2 domain 15 64 IPR001471 GO:0003700|GO:0006355
Mibi08g2364 206 Gene3D AP2/ERF domain 14 73 IPR036955 GO:0003700|GO:0006355
Mibi08g2364 206 FunFam ethylene-responsive transcription factor ERF014-like 14 74 - -
Mibi08g2364 206 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 11 142 - -
Mibi08g2364 206 SUPERFAMILY DNA-binding domain 15 73 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2364 Mibi-ChrMibi08 41390005 41390625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2364 16 121 AP2-EREBP Transcription Factor Family AT1G21910 68.750 2.63e-42 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi08g2364 AP2 2.5e-12 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2364 08 41390005 41390625 Mibi08g2364 08 41390005 41390625 ECH