Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2361 ATGTCTTTGAGCCCTCCTCGCCCACCAAGAATAAACTACCAACTCTACTGGTGCTTCCTCTGTAATCGCCTTGTGAGACTCTCCCCCTCCCACATCATCTTATGCCCTCGTTGCCTCCAAGGCTTCCTCACCGAATTCAACCTCCCCCTCCCTTCCCCTCAATCCCCTCTCCTCAACGCCCTTTACCTCCTCCTCCACCCACCCAGCAATCCCGACTTCCAGGGCCCTCCACGTGTCCACATACCACCTCGCCGACATCGTAGTCTTGATTCCATACCTGCCGGTTTCGACCCTCAACTAGAAACCCAACTACCTCGTCCTCGCGATTGGGTTGTTGTTCGACCCGGGGACCGTTCCACGTCATTGGAAAGGCTTCCTCGGCGGCGGGTTGACCCGAGGGACTACTATTTCGGGCCGGGCTTGGATGAACTGATCGAGAATCTGACGGAGAATGACAGGCAGGGCCCACCTCCTGCGCAGGACAGAGTTATAGAGGGAATTCCGAGGGTGAGAATAAGGGAGAGTCATTTGAAGGAGAACCCTCATTGTCCTGTTTGTCAGGATGATTTTGAGGTGGGTGGGGAAGCTAGGGAGCTGTCCTGTAACCATATATACCATTCTGATTGTATTGTGCCATGGTTAAAGCTACACAATTCTTGCCCTGTTTGCCGCCATGAGGTCGCCGTACCTTCCGACGACGGCGGCGGAGGTGGCAGGTTGCGGCGGTGTTTGAGGTGGGCCCACTTGGCTTCGCTATGGCCTTTCCATGGAAGGTTCCGACGGGTTAATCCTGAAAACTAG 801 0.5518 MSLSPPRPPRINYQLYWCFLCNRLVRLSPSHIILCPRCLQGFLTEFNLPLPSPQSPLLNALYLLLHPPSNPDFQGPPRVHIPPRRHRSLDSIPAGFDPQLETQLPRPRDWVVVRPGDRSTSLERLPRRRVDPRDYYFGPGLDELIENLTENDRQGPPPAQDRVIEGIPRVRIRESHLKENPHCPVCQDDFEVGGEARELSCNHIYHSDCIVPWLKLHNSCPVCRHEVAVPSDDGGGGGRLRRCLRWAHLASLWPFHGRFRRVNPEN 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2361 266 CDD RING-H2_RNF126_like 183 224 - -
Mibi08g2361 266 FunFam E3 ubiquitin-protein ligase RING1-like 146 230 - -
Mibi08g2361 266 SMART ring_2 183 223 IPR001841 -
Mibi08g2361 266 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 127 227 - -
Mibi08g2361 266 Pfam Ring finger domain 182 224 IPR001841 -
Mibi08g2361 266 Pfam zinc-ribbon 14 45 IPR039525 GO:0061630
Mibi08g2361 266 SUPERFAMILY RING/U-box 163 230 - -
Mibi08g2361 266 ProSiteProfiles Zinc finger RING-type profile. 183 224 IPR001841 -
Mibi08g2361 266 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 146 230 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2361 Mibi-ChrMibi08 41381203 41382003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2361 142 255 C3H Transcription Factor Family AT1G68180 39.669 5.97e-23 92.4