Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2358 ATGGCCATGTCGATGCCCATAGACATGTACACTATCCCTGACCTCGACCTCTCCGACTACGCAGCCGCCACTTCTTCCGACGACGATTGTAACTACTGGAACCACTGGTCACCGGTGGTCAACTGGGACACCTTCACATGTGGGCCCGGCCATGAAGGCTTCCACGACCTCATGGAAACCATGATGGACGTTGACGACACCACCCCCGAAACCGATCACAGCATCGAAGGAGACGAAGGCTGCACCACCAACACGACGGACGCCGCCACCGCAGACGACGAGGTCGACGGCGGCCCTACGGAAGATTTAAAAGGCCTGAGACTTGTCCACCTCCTGATGGCGGCGGCGGAGGCCCTGGCCGGAGTCAGCAAAAGCCGCGATTTGGTGATGGTGATATTGGTTCGGCTCAAGGAGTTAGTGTCACCCACACATGGAACCAACATGGAACGTCTAGCATCTTATTTTACAGATGCCCTTAGGATGTTAGTAGAAGGGTCCCACACTACTAGTAATAAGCACTTCAATTATATCGCCGCCGAGGATGGCTGCGACATGATGACGGCGTTCCAGCTCCTCCAGGACATGTCACCGCACGTCAAGTTCGCACACTTCACGGCCAACCAGGCCATTCTCGAGGCCGTGGCACAAGAAAGGCGGGTCCACATAGTCGACTATGACATCATGGAGGGGGCCCAATGGGCCTCCTTCATGCAGGCCCTCGCCTCCCGCAAGGATGGCCCACATCTCAGGATCACCGCCATATCAAGAACTGGGGCTTCTCGCAGATCAATAGCAACCGTCCAAGAGACGGGCCGTCGTTTGACCGCCTTCGCCGCTTCCATCGGTCAACCCTTCTCCTTTCACCAATGCAGGCTTGACTCCGACGAGACATTCCGGCCCGCCGCAGTGAAACTGGGCCGCGGTGAGGCGGTGGTGTTCAACTGCATGCTCCATTTGCCACATCAGACTTACCGGACGGCAGAGTCGGTGGAGTCGTTTCTCCGGGGGGCGGCGGAGATGAGGGCGAGGGTGGTGACGGTGGCGGAGGAGGAGGGAGGGCCCGCGGGGAAGGAGGTGGGCTTTGTGGGCAGGTTTATGGATCGGCTGCATCACTATTCGGCGGTGTGTGATTCCATGGAGGCGGGCTTTCCGATGCAGGGCCGGGCCCGGGCTTTGGTGGAGCGGGCCTTTCTGGGCCCGAGGATAGGGGCGTCGTTGGGCCGGATATATAGGATGGGGGAATCGGAGAGGGAGAGGGAGAGGGAGAGGGGGTCGTGGGGGGAGTGGTTGGGTGAGGGAGGGTTCAGGGGAGTTGACATAAGCTTTGCTAATCAGTGTCAAGCGAAGCTGTTGCTCGGTTTGTTCAATGATGGTTATGGAGTGGAGGAGGTTGGTGGCAAAAATAGGCTTGTTTTGAGTTGGAAATCAAGGCCCTTGCTTTCTGCCTCTGTTTGGACACCACCTTTTGTAAATTGA 1476 0.5786 MAMSMPIDMYTIPDLDLSDYAAATSSDDDCNYWNHWSPVVNWDTFTCGPGHEGFHDLMETMMDVDDTTPETDHSIEGDEGCTTNTTDAATADDEVDGGPTEDLKGLRLVHLLMAAAEALAGVSKSRDLVMVILVRLKELVSPTHGTNMERLASYFTDALRMLVEGSHTTSNKHFNYIAAEDGCDMMTAFQLLQDMSPHVKFAHFTANQAILEAVAQERRVHIVDYDIMEGAQWASFMQALASRKDGPHLRITAISRTGASRRSIATVQETGRRLTAFAASIGQPFSFHQCRLDSDETFRPAAVKLGRGEAVVFNCMLHLPHQTYRTAESVESFLRGAAEMRARVVTVAEEEGGPAGKEVGFVGRFMDRLHHYSAVCDSMEAGFPMQGRARALVERAFLGPRIGASLGRIYRMGESERERERERGSWGEWLGEGGFRGVDISFANQCQAKLLLGLFNDGYGVEEVGGKNRLVLSWKSRPLLSASVWTPPFVN 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2358 491 MobiDBLite consensus disorder prediction 65 99 - -
Mibi08g2358 491 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 84 482 IPR005202 -
Mibi08g2358 491 ProSiteProfiles GRAS family profile. 99 486 IPR005202 -
Mibi08g2358 491 Pfam GRAS domain family 108 486 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2358 Mibi-ChrMibi08 41330855 41332330 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2358 66 487 GRAS Transcription Factor Family AT3G54220 33.718 3.25e-54 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mibi08g2358 GRAS 4.4e-94 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2358 08 41330855 41332330 Mibi08g2358 08 41330855 41332330 ECH