Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2355 ATGGAATCTATCTTCTACTTCTCTCTCATTTCTCTCTTCTTCTCTGCCATATCTGCTTACACTTTCACAGAATCCATCAGTCCAAATTTCACTGCAACATATCTCCAATTCATAAACCTTTCTGGCACCTTCTTGTCATCTCGCAATGGAACATTCAAGGCTGCTATATACAATCCTGAAAATCAACAATCCAGATTCTACCTGTGTGTCATACACGTGCCATCCCACACCATCATTTGGTCGGCTAATCGTGATGCCCCCATCTCAAATTCTGATACCATGAATCTTACCGTCAAAGGAATCACTATTTTTGATCAAAAAGGAAACCTCAAATGGTCAACCCCACCATTGAAATCACCAGTTTCCGCACTACAACTCGCTGAAACAGGCAACCTCGTCTTACTTGATCGTTCCAATGGTTCTCTTTGGGAGAGTTTCCAGCACCCAACAGACACAATTGTTATTGGACAGCGTTTACCTGTTGGGACATGGCTGTCTAGTGCTATGTCAGGGTCTGATTTGTCAACTGGGGATTACAACTTGAGTATCACTCCTTCTGATGCAATACTAGAGTGGCAGGGGCAGACATATTGGAAGTTATCGATGGCCACAAACGCGTTTAAGGAGTCAAATCTCGTGGTGGAATTCATGGCTATAAACAGAACAGGTGTTGATCTCTTTGGAAGCAATGGAACAGTGACTGTGTATAGGGTGGTCTTGTCCATGGCTGATTTCCGAATTGCCAAATTGGCTGTTAATGGCCAGTTTATTGTCCAAAGCTTTTCCGGTACTGGCTGGGTCCAGGATTTTGTGGGGCCAAATGATAGTTGTGAGACTCCATTTTTTTGTGGCAGATTGGGATTATGTACTCATGACCCTTCCTCCTCTGCTCCTACTTGTTCTTGTCCCCCAAACTTCCATGCAGGCTCAAGTAATGTTCCTGGTTGTGTGCCTAGCAATGGTTCTTATTCTCTTCCATCTGCGTGTGATTCGTCTGTTCACGACAGTGCATCAAATTCTTCAGCTGTTTCATATTTGAAACTCGGGGATGGTATCAAGTACTTTGGCAATACCTACTCTAACACCCTAACATATATGGTTAACTTAACGATATGCCAAGATCTCTGTTCATGGAATTGTTCGTGCTCGGGATTTTTCTACGACAATTCGTCTGGTTCCTGCTACATGCTTGGATATGAGTTGGGTTCTATTATGTCAAGTGGTGGGGGTGCAAGTAACTCGTTGGGCTACATAAAAGTTATTGTTGGGTCTGCTACTACTATTGATCATCCTACTTCTGATGAAGAGGGGCTTCCTGTGCCTGTTATGGTTGCAATACCTCTTGCTGGATTCATTATTGCTATGGCTATCGGTTTCCTCTGGCTTAGAAGATATAGAATCTCAAGGGCAAAAGAGATAAAATTAGGAAACTTCACATCACGTTCTTCAGAGGACTTGGAGGCGTTCTATATCCCAGGTTTACCAAAAAGGTTTGATTATGAAGAACTTGTAGAGGCTACTGATAATTTCAAGACTCTAATAGGTTCAGGTGGATTTGGTGCGGTGTTCAAGGGACAACTTCCTGATAAGACCGTGGTGGCGGTGAAGAAGATAGTAAATCTTGGAAATCAAGGGAAAAAGGATTTCTGCACTGAGATTGCAATTATTGGAAGCATTCACCACGTTAATTTGGTGAAACTGAGAGGCTTTTGTGCAGAAGGAAGACAACGTCTGTTAATATATGAGTACATGAACCGTGGCTCCCTGGATCGCACCCTCTTTGGCGGTGGACCAGTCTTAGAATGGCAAGAGAGGCATGATATAGCACTAGGAACAGCACGTGGACTTGCCTATCTGCACGGTGGATGTGAGCAAAGGATCATTCACTGTGACATCAAACCTGAGAATATTCTTCTGCATGATCACTTTCAGGCTAAGATATCTGATTTTGGACTCTCAAAACTCCTCAGCACTGAACAGTCTGGTTTATTCACAACAATGAGAGGCACACGTGGTTATTTAGCTCCAGAGTGGCTAACCAACTCTGCAATAACAGAGAAGACGGATGTTTATAGTTTTGGAATGGTGCTACTTGAACTAGTGAGTGGAAGAAAGAATTGTTCAGTGGGGTCACAAAGTCCTAGCAGGGATGAAAGTATGAGTAGCAATTCAGGAGCATCAGGAACAGGATTAGTTTATTTTCCACTATTTGCCTTGGAGATGCATGAGCAAGGAAGGTACCTAGACTTGGCTGATCATAGGCTAGAAAGGCGAGTTTCAAGTGAGGAGGTGGAGAAACTAGTGCGTGTGGCCTTGTGTTGTGTTCATGAAGAACCATCACTTAGGCCAAATATGGCAGGTGTTGTTGGCATGTTGGAAGGTGGGACTCCATTGGCCCAACCAAGGATTGAATCTTTAAATTTCTTGCGCTTTTATGGGCGTAGGTTTTCGGAGGCTTCCATGATAGCTGAGGAAAACACAGTGTCTCAACTGGCACTGAAATCTTCAGCTACAGCTAATGGTTTTCAAACCGCTTTTTCTTACATTTCTTCGCATGATGTCTCCGGGCCTAGATGA 2577 0.435 MESIFYFSLISLFFSAISAYTFTESISPNFTATYLQFINLSGTFLSSRNGTFKAAIYNPENQQSRFYLCVIHVPSHTIIWSANRDAPISNSDTMNLTVKGITIFDQKGNLKWSTPPLKSPVSALQLAETGNLVLLDRSNGSLWESFQHPTDTIVIGQRLPVGTWLSSAMSGSDLSTGDYNLSITPSDAILEWQGQTYWKLSMATNAFKESNLVVEFMAINRTGVDLFGSNGTVTVYRVVLSMADFRIAKLAVNGQFIVQSFSGTGWVQDFVGPNDSCETPFFCGRLGLCTHDPSSSAPTCSCPPNFHAGSSNVPGCVPSNGSYSLPSACDSSVHDSASNSSAVSYLKLGDGIKYFGNTYSNTLTYMVNLTICQDLCSWNCSCSGFFYDNSSGSCYMLGYELGSIMSSGGGASNSLGYIKVIVGSATTIDHPTSDEEGLPVPVMVAIPLAGFIIAMAIGFLWLRRYRISRAKEIKLGNFTSRSSEDLEAFYIPGLPKRFDYEELVEATDNFKTLIGSGGFGAVFKGQLPDKTVVAVKKIVNLGNQGKKDFCTEIAIIGSIHHVNLVKLRGFCAEGRQRLLIYEYMNRGSLDRTLFGGGPVLEWQERHDIALGTARGLAYLHGGCEQRIIHCDIKPENILLHDHFQAKISDFGLSKLLSTEQSGLFTTMRGTRGYLAPEWLTNSAITEKTDVYSFGMVLLELVSGRKNCSVGSQSPSRDESMSSNSGASGTGLVYFPLFALEMHEQGRYLDLADHRLERRVSSEEVEKLVRVALCCVHEEPSLRPNMAGVVGMLEGGTPLAQPRIESLNFLRFYGRRFSEASMIAEENTVSQLALKSSATANGFQTAFSYISSHDVSGPR 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2355 858 ProSitePatterns Protein kinases ATP-binding region signature. 514 537 IPR017441 GO:0005524
Mibi08g2355 858 Gene3D - 36 148 IPR036426 -
Mibi08g2355 858 PANTHER OS07G0415500 PROTEIN 4 803 - -
Mibi08g2355 858 CDD STKc_IRAK 514 794 - -
Mibi08g2355 858 PIRSF SRK 1 843 IPR024171 GO:0004674
Mibi08g2355 858 SUPERFAMILY Protein kinase-like (PK-like) 485 792 IPR011009 -
Mibi08g2355 858 Pfam D-mannose binding lectin 77 159 IPR001480 -
Mibi08g2355 858 CDD B_lectin 38 149 IPR001480 -
Mibi08g2355 858 Pfam S-locus glycoprotein domain 230 307 IPR000858 GO:0048544
Mibi08g2355 858 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 200 IPR036426 -
Mibi08g2355 858 ProSiteProfiles Bulb-type lectin domain profile. 29 147 IPR001480 -
Mibi08g2355 858 CDD PAN_AP_plant 338 420 - -
Mibi08g2355 858 FunFam serine/threonine-protein kinase PBS1-like 478 583 - -
Mibi08g2355 858 ProSiteProfiles EGF-like domain profile. 273 312 IPR000742 -
Mibi08g2355 858 FunFam Serine/threonine-protein kinase 584 800 - -
Mibi08g2355 858 ProSiteProfiles PAN/Apple domain profile. 329 422 IPR003609 -
Mibi08g2355 858 Pfam Protein kinase domain 511 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2355 858 SMART serkin_6 508 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2355 858 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 42 147 - -
Mibi08g2355 858 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Mibi08g2355 858 Gene3D Phosphorylase Kinase; domain 1 481 583 - -
Mibi08g2355 858 Gene3D Transferase(Phosphotransferase) domain 1 584 800 - -
Mibi08g2355 858 SMART blect_4 36 149 IPR001480 -
Mibi08g2355 858 ProSiteProfiles Protein kinase domain profile. 508 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2355 Mibi-ChrMibi08 41289001 41291577 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2355 452 801 Receptor kinase-like Gene Family AT5G20050 39.946 1.85e-77 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mibi08g2355 Pkinase 9.2e-49 CL0016