Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2350 ATGAGTAAACCCAGAGTTTATAGGAAACCCACCAAGCAAACCATTGCCAACCAGAACCAAAAGCCGCAGAAATCAGAGAAACAACCCTCATGGGCAGTGGTAAGAGGCCTATTGACTTGTAGAAACGTTCAAACACAACCGCAGCAGAAGCGGCAGCAACAAATTCCTGAAGGGAAACAACAGCCAAAGAAGAAACAAGAGCAGCGAAAATTGCAGGAAGAAAGAGTGGTCCCAGAAGATCAGAACGGCAAGAAATGCAAGAAGATGAAATGTTCAGGCTCACTTTGTAATAACACCAATATCATGGCAAAGCCTGAAACAGGTTGTCCTGATGTTCCCAACAAAAAGGCCTCACTTTCTGCATGTAGCAGTAGTAGCAACAATGATTCTTCAAGCAGATCCATGAAAGCTCCTCCACGAGAACCAAACGCTGCCGTTTCGGCATCTTCTTCTTCTTCAATGTCAGCATCTTCAAGTTCTTCTGTTAGTGGGTCTTTCAAGGGAATGCCCTTTAGGAGACTCTCTGGTTGTTATGAATGCAGAATGGTAGTTGACCCTGTTTTGGGTTTCACCAGAGACCCTTCTCTTCGGAGTAGCATTTGTTCATGCCCAGATTGTGGTGAGATCTTCACCAAAGCTGAAAGCTTGGAGCTTCATCAGGCCGTTAAACATGCAGTTTCGGAACTGGGTCCTGAAGATACGAGCAAGAACATAGTAGAAATCATATTTCACTCAAGCTGGCTAAAGAAACAGGCCCCAGTCTGCAAAATAGATCGCATCCTCAAAGTCCACAACACCCAGAAGACGATTTCTAAATTCGAAGAATACAGAGACTCCATTAAGGCCAAAGCCACAAAGCTCGTTAAGAAACACCCACGTTGCATAGCAGATGGCAACGAGCTGCTCAGGTTTCACGCCACCACTTTTGTATGCTCTCTGGGCCTAAACGGTTCGTCCAATCTCTGCAACTCAATGCCACAGTGCAATGTTTGCAACATAATCAAGAATGGATTTAAGGTGGCCGCAGAAACGAACGGAGAAAACGACGGGAAAGGAATATTAACGACGGCGACGAGCGGGAAGGCACACGATAAAGCGGTGGTTTCAGTGGACGAGAAAAACGACATTAGAGCAATGCTGGTTTGTCGGGTAATAGCTGGCAGGGTGAAGAAGAATATGGAAGGGAGCATGGAGGAGTATGATTCGATAGGAGGTGATGTTGGGGCTTATTCTAATTTGGATGAGTTGTATGTTTTTAACCCAAGAGCTATATTGCCTTGTTTCGTTGTGATTTACAGAGGTTTTTAA 1308 0.4503 MSKPRVYRKPTKQTIANQNQKPQKSEKQPSWAVVRGLLTCRNVQTQPQQKRQQQIPEGKQQPKKKQEQRKLQEERVVPEDQNGKKCKKMKCSGSLCNNTNIMAKPETGCPDVPNKKASLSACSSSSNNDSSSRSMKAPPREPNAAVSASSSSSMSASSSSSVSGSFKGMPFRRLSGCYECRMVVDPVLGFTRDPSLRSSICSCPDCGEIFTKAESLELHQAVKHAVSELGPEDTSKNIVEIIFHSSWLKKQAPVCKIDRILKVHNTQKTISKFEEYRDSIKAKATKLVKKHPRCIADGNELLRFHATTFVCSLGLNGSSNLCNSMPQCNVCNIIKNGFKVAAETNGENDGKGILTTATSGKAHDKAVVSVDEKNDIRAMLVCRVIAGRVKKNMEGSMEEYDSIGGDVGAYSNLDELYVFNPRAILPCFVVIYRGF 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2350 435 MobiDBLite consensus disorder prediction 1 30 - -
Mibi08g2350 435 MobiDBLite consensus disorder prediction 11 27 - -
Mibi08g2350 435 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 88 432 - -
Mibi08g2350 435 MobiDBLite consensus disorder prediction 120 165 - -
Mibi08g2350 435 ProSitePatterns Zinc finger C2H2 type domain signature. 201 224 IPR013087 -
Mibi08g2350 435 Gene3D - 225 433 - -
Mibi08g2350 435 MobiDBLite consensus disorder prediction 144 165 - -
Mibi08g2350 435 MobiDBLite consensus disorder prediction 120 137 - -
Mibi08g2350 435 ProSiteProfiles Zinc finger C2H2 type domain profile. 201 229 IPR013087 -
Mibi08g2350 435 MobiDBLite consensus disorder prediction 42 88 - -
Mibi08g2350 435 MobiDBLite consensus disorder prediction 42 56 - -
Mibi08g2350 435 SUPERFAMILY ADP-ribosylation 226 434 - -
Mibi08g2350 435 MobiDBLite consensus disorder prediction 57 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2350 Mibi-ChrMibi08 41254442 41255970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2350 166 433 C2H2 Transcription Factor Family AT1G75710 53.584 2.56e-102 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi08g2350 None None None