Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2349 ATGGGACACAATCACAGGCATTACTCCATGGATGATGGGAAGGCTAACCTTCCGGTTTCACCTCCAACTGCCAAGAACCAGTTCCGTCCAATCAATCCTGATACTACTTCGTCTTCTTCATCTTCAATCTCTTCTTCTTCACCGCCGGACTTCCTCCGGCATGTTCAGGCCGCCTTCAAGCGTCATCGTCCTCTCGGCACAGTGCAACCAAATATAAGACCAAGGCGCATGATGGTTCCTAAACGTGAGGTGGCGAGAAATTCTGCGCTGAAAGTTGGTCCAAGTGTAGATGATAAGAAGTCCCAGGAGATGACTTCAAGAAAGGTTCAGTCGGAGATGGAGTCTTGTGCGCATCGAAATAGCACAACTTCAATGGTTAGAGAAGGTCAAGAGGATGTATCAATCACACTTCCTTCGGTTTCGCGAAATTGCTTCAATGCACTTGACAAAGAATGCAATCCATTGAACGCACAAGAATGTCCTTTAAATGAAATGGCTAACTGTAAAGACAAGGTTGTCATGCATTCTTTGCCAGTGGAATTTCAAAATGTAGATGGTCAGAAGAAAGTCCAGTTCGCAGTAGGAGACAATACTACTGCCCAGGGGGCCGATGATGGAAAGGCCACTGAGTTGGAGAACTTATCATCTCATATGGGTTCACTTGCATTGACAGAAATGGAATGGGCTGCAAGCACCCAGCCGGAAGAATTTAATTTATTCAATCAAGATCCAAAGCACCAAAGTGTTTTGCAGGCAGAATCTGAATTAATTTTGAGATCTGATGGAGGATTAAATTCCCAGTTGGCTAAAAGAACAACAGCTATTCAGGATCATCTGCAGCAATTCAGAAACTTTTTAAGTCAGCCTGCCACTCAATCTTCAGTAGTGGGACCTTCATGTGCTACCACAACATCTGTCTATTCGTCTTCAGCTCCTATGCTAAATCCAACAACCCATTATTCTCATTCACATGTTGACGGTGGTTCAAATGTGGCAGCAGAACCTTTAAGGGAAAACGATGTTAATAGTCATCTGATAACTCAAGGAGTTGTGAAATCATCCAGTGCTTACCTAAAAGAGACCAATAAAATGTCAGTGGATCAAGCAGCAGTTGCACCTAGTTCTGCCACTAATGCAGGGTTACCATTTAAGGATGATGACCTATGTAAGGAGCAGCAAAGCAGCATGCTAAAGGAAGGTAATATTTCTAAAAGTACTTGTGATGATAAGCCATCTAAGGGGAAGGAATCTGCAGATGTTACCAACATACAGCCTCAGGCTCCAATGTCTAGAACTTCATTTTCAGACGTTAAGCTGGATTCATCCAAGTCAGAAAAACAAGAGAAGGCAGTAAGTAGTAAAGGCACATCAACTAATCGGAAAAGGGCCTACGACCCTGATTTGTTTTTCAAAGTAAATGGCAAGCTATATCAAAGGCTTGGCAAGATCGGTAGTGGAGGAAGTAGTGAAGTACACAAAGTAATATCATCGGATTGTACAATCTATGCACTTAAAAAGATCAAGCTAAAGGGTCGTGATTATGCCACTGCATATGGATTCTGTCAAGAGATCGAGTATCTGAATAGGCTGAAGGGAAAGAATAATATCATACAGCTGATTGACTATGAGGTGACTGACAAGACTTTGCTTGCTGAAGTCCTGAGAGGCTCCTTCAGTAGTAAAGACAGCCGAGTCAAAGACGATGGATATATATACATGGTGCTTGAATATGGGGAAATTGATTTGGCTCATATGCTGTCTCAGAAGTGGAAGGAACTGGATGGATGCAACCAGACCATAGACGAGAATTGGCTTCGATTTTATTGGCAGCAAATACTTCAAGCTGTCAATACAATACATGAGGAACGTATAGTGCATTCTGATCTGAAGCCAGCTAACTTTCTTCTCGTCAAAGGTTCCCTAAAACTGATTGATTTTGGCATAGCCAAAGCAATAATGAGCGACACAACAAATATCCAACGGGATTCACAGGTGGGTACTTTGAGTTACATGTCTCCAGAGGCGTTTATGTGCAATGAAAGTGATGCAAACGGAAATATCATCAAGTGTGGCCGACCATCGGATATCTGGTCTCTGGGCTGTATTCTTTATCAAATGGTATATGGCAGGACGCCATTTTCGGAGTACAAGACGTTCTGGGCCAAGTTCAAAGTTATAACAGATCCAAATCATGAAATCACGTATGAACCCGTTTCAAACCCATGGCTTCTGGATCTCATGAAGAGGTGTCTATCATGGGACCGTAATGAAAGATGGAGAATTCCTCAGCTTCTCCAACACCCGTTTCTTGTTCCACCAGCTCCGCCACAGCCTTCCCAGTCCCAAGACCAAAGCTTTAAATTGGTACAATTTATAGCTGAAGCTTGTATAGATGACCCAGAAGCTTCAAAGCTCTGCTGTCAGCTCCAGCAGGTGGTTGGCGATCCCCTCAAGTTGATGGCTCCCCACTCTCTTAGTTCACGAGATCAACAATGTAAACTATTATCCCAATTGTCAGAACTTTGCCTCCAGCTGCATGACCGACTAAAAATTTCTGATAGACAGGCAACATAG 2574 0.4316 MGHNHRHYSMDDGKANLPVSPPTAKNQFRPINPDTTSSSSSSISSSSPPDFLRHVQAAFKRHRPLGTVQPNIRPRRMMVPKREVARNSALKVGPSVDDKKSQEMTSRKVQSEMESCAHRNSTTSMVREGQEDVSITLPSVSRNCFNALDKECNPLNAQECPLNEMANCKDKVVMHSLPVEFQNVDGQKKVQFAVGDNTTAQGADDGKATELENLSSHMGSLALTEMEWAASTQPEEFNLFNQDPKHQSVLQAESELILRSDGGLNSQLAKRTTAIQDHLQQFRNFLSQPATQSSVVGPSCATTTSVYSSSAPMLNPTTHYSHSHVDGGSNVAAEPLRENDVNSHLITQGVVKSSSAYLKETNKMSVDQAAVAPSSATNAGLPFKDDDLCKEQQSSMLKEGNISKSTCDDKPSKGKESADVTNIQPQAPMSRTSFSDVKLDSSKSEKQEKAVSSKGTSTNRKRAYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCTIYALKKIKLKGRDYATAYGFCQEIEYLNRLKGKNNIIQLIDYEVTDKTLLAEVLRGSFSSKDSRVKDDGYIYMVLEYGEIDLAHMLSQKWKELDGCNQTIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLSYMSPEAFMCNESDANGNIIKCGRPSDIWSLGCILYQMVYGRTPFSEYKTFWAKFKVITDPNHEITYEPVSNPWLLDLMKRCLSWDRNERWRIPQLLQHPFLVPPAPPQPSQSQDQSFKLVQFIAEACIDDPEASKLCCQLQQVVGDPLKLMAPHSLSSRDQQCKLLSQLSELCLQLHDRLKISDRQAT 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2349 857 MobiDBLite consensus disorder prediction 1 50 - -
Mibi08g2349 857 CDD PKc_Mps1 475 770 - -
Mibi08g2349 857 SMART serkin_6 477 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2349 857 SUPERFAMILY Protein kinase-like (PK-like) 471 781 IPR011009 -
Mibi08g2349 857 ProSitePatterns Protein kinases ATP-binding region signature. 483 505 IPR017441 GO:0005524
Mibi08g2349 857 MobiDBLite consensus disorder prediction 417 437 - -
Mibi08g2349 857 MobiDBLite consensus disorder prediction 108 129 - -
Mibi08g2349 857 MobiDBLite consensus disorder prediction 20 50 - -
Mibi08g2349 857 Pfam Protein kinase domain 477 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2349 857 FunFam serine/threonine-protein kinase mph1 isoform X1 591 773 - -
Mibi08g2349 857 PANTHER MIXED LINEAGE PROTEIN KINASE 37 800 - -
Mibi08g2349 857 MobiDBLite consensus disorder prediction 92 129 - -
Mibi08g2349 857 Gene3D Transferase(Phosphotransferase) domain 1 592 773 - -
Mibi08g2349 857 Gene3D Phosphorylase Kinase; domain 1 470 556 - -
Mibi08g2349 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Mibi08g2349 857 FunFam serine/threonine-protein kinase mph1 isoform X2 470 557 - -
Mibi08g2349 857 MobiDBLite consensus disorder prediction 391 460 - -
Mibi08g2349 857 ProSiteProfiles Protein kinase domain profile. 477 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2349 Mibi-ChrMibi08 41245500 41250615 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2349 483 771 MAP Kinase Kinase Kinase AT4G08470 28.669 3.40e-23 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Mibi08g2349 Pkinase 1.3e-55 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2349 08 41245500 41250615 Mibi08g2349 08 41245500 41250615 ECH