Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2348 ATGCGAGAGACCGTAGCAATGGAGGATTTGCAGTGTGCTCTAAAAGATCGTTATTTAACGGTTTCCACCGTGGAAGATAAGGGTCGCTGTCTCTTAGCTACGAGGGATTTTTACCCAGGAGACGTTATTATAAGCCAAGAGCCTTATGTGTGTGTGCCAAATAATTCTTCAGCTGAAACAAGGTGTGATGGGTGTTTCACTACAAGTAAACTTAAAAAGTGCTCTGGCTGCCAAGTTGTCTGGTATTGTGGAAGTACATGCCAGAGGGCAGAGTGGAAGTTGCATCGTCTTGAATGTGAAGTCCTCTCAAGGCTGGAAAAGAACAGGAGAAAATCTGTCACACCATCCATCCGACTGATGATTAAACTTTATCTTCGAAGGAAGTTACAAAGTGAAAAGGTTATCCCAACCACTGCTACGGACAACTATAACTTGGTGGAGGCATTAGTGGCACTGATGGTTGTTCTTTTTAACTCCCACTTTCATCTAGACTTGTCTGACATCAATGAGGAGCAGCTGGTTATATACGCACAGATGGCTAATCTCGTAAACTTAATATTGCAATGGCCTGATATCAACATGAAAGAGATTGCAGAAAATTTTTCCAAGTTTGCATGCAATGCACATACCATTTGTGACAGTGAACTGAGACCCTTGGGGACAGGATTGTATCCTGTGATTTCCATAATCAACCACAGTTGCTTGCCCAATTCAGTGTTGGTTTTTGAGGGAAGATCAGCTGTAGTTCGTGCTGTACAGCATATACCCAAAGGTTCGGAGGTGCTGATAACTTATATTGAAACTGCTGGGAGCACTATGACTCGGCAGAAGGCTCTCAAAGAGCAGTACCTATTCACTTGCTCCTGTCCCCGTTGTGTTAGAATGGGCCAATCTGATGATATCCGAGAAAGTGCAATTTTGGAAGGATACAGATGCAAGGATGAAAAATGCTGTGGTTTCTTGATTCGTAATAATGATGGAAAAGGATTTCAATGCCAAGAATGTGGACTAGTCAGGGACATGGAGGAGATAAAGTTAATTGCAACAGAAGTAAAATCACTATCTGAAGACAAAGCTTCTAAACTTCATGCAACTGGCAATTATCAGGAAGCTGTTGCTGTATACAAAATAATAGAGAAATTCCAATCAGAATTGTGCCATCCTTTTTCAATCAGCTTGATGCAAACTCGAGAGAAGCTTTTGAAGTTATTGATGGAGATGGAACATTGGAGAGAAGCTCTGGCATACTGCAAATTGACCTTGCCAGTCTATCAAAGAGTTTATCCAGCAGTTCATCCATTGCTTGGTTTGCAATATTATACTTGTGGAAAGCTTGAATGGTATCTAGGGGATACGGAGGGTGCTGTTAAATCGCTGACTAAGGCAGTGGATGTACTAAGAATCACTCACGGGACAAAGACACCTTTCATGAAGGAACTCTTGATGAAGTTGGAAGAAGCCCGTGCAGAAGCCTCTTACCAACAGTCCTCCAAAGATAATTAG 1503 0.4205 MRETVAMEDLQCALKDRYLTVSTVEDKGRCLLATRDFYPGDVIISQEPYVCVPNNSSAETRCDGCFTTSKLKKCSGCQVVWYCGSTCQRAEWKLHRLECEVLSRLEKNRRKSVTPSIRLMIKLYLRRKLQSEKVIPTTATDNYNLVEALVALMVVLFNSHFHLDLSDINEEQLVIYAQMANLVNLILQWPDINMKEIAENFSKFACNAHTICDSELRPLGTGLYPVISIINHSCLPNSVLVFEGRSAVVRAVQHIPKGSEVLITYIETAGSTMTRQKALKEQYLFTCSCPRCVRMGQSDDIRESAILEGYRCKDEKCCGFLIRNNDGKGFQCQECGLVRDMEEIKLIATEVKSLSEDKASKLHATGNYQEAVAVYKIIEKFQSELCHPFSISLMQTREKLLKLLMEMEHWREALAYCKLTLPVYQRVYPAVHPLLGLQYYTCGKLEWYLGDTEGAVKSLTKAVDVLRITHGTKTPFMKELLMKLEEARAEASYQQSSKDN 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2348 500 SMART set_7 17 272 IPR001214 GO:0005515
Mibi08g2348 500 Gene3D SET domain 30 292 IPR046341 -
Mibi08g2348 500 ProSiteProfiles Zinc finger MYND-type profile. 62 99 IPR002893 -
Mibi08g2348 500 Pfam MYND finger 62 99 IPR002893 -
Mibi08g2348 500 Gene3D Tetratricopeptide repeat domain 420 499 IPR011990 GO:0005515
Mibi08g2348 500 Gene3D - 61 111 - -
Mibi08g2348 500 Gene3D - 112 208 - -
Mibi08g2348 500 ProSitePatterns Zinc finger MYND-type signature. 62 99 IPR002893 -
Mibi08g2348 500 ProSiteProfiles SET domain profile. 17 266 IPR001214 GO:0005515
Mibi08g2348 500 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 22 486 - -
Mibi08g2348 500 SUPERFAMILY SET domain 19 265 IPR046341 -
Mibi08g2348 500 SUPERFAMILY TPR-like 358 465 IPR011990 GO:0005515
Mibi08g2348 500 Pfam SET domain 28 265 IPR001214 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mibi08g2348 SET 7.6e-14 No_clan