Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2344 ATGGCGGCTTCCATCGACAACCGTCAATACGCCGTCCCATTAAACGGCGTCAACCGCTCCTTCAACGGCGTCTCCCCTCATTTCAACTTCCAACCACCAAACCTCAAGAGATCCTCCGAACCCTTCTCCATGGACTTCGACTCCTCCAGCGAAGACGAAAACGACGCCGACGAGCTCAAAGCCCTAATGCGAAAGGCCAACTCCGAAGTCGAATCCTCCATATTTGACCCACGTGACGACGGAACCTCCGACTCATGGATCCAACGTAACGCCTCCATGGTCCGACTCACCGGTAAACACCCATTCAACTCGGAGCCACCACTCACTCGCCTCATGCACCACGGCTTCATAACCCCGGTCCCACTCCACTACGTCCGTAACCATGGCTCTGTCCCTAAAGCCACATGGGACGACTGGGTCGTCGAGGTTTGTGGACTGGTCAAACGTCCCGCTAAGTTCACCATGGACCAACTCGTGAACGAGTTCCCGACTCGGGAGATGCCGGTGACCCTGGTTTGTGCTGGCAATAGGAGGAAGGAACAGAACATGGTGAAGCAGAGCATAGGTTTTAATTGGGGTGCTGCTGCTATTTCCACTACTGTGTGGAAAGGTGTGCCTTTAAGGTACTTGCTTAAGAGGTGTGGGATTTACAGCCGTACAAAGGGGGCATTACACGTGTGTTTTGAGGGTGCTGAGGATCTGCCAGGTGGCGGTGGGTCCAAGTATGGGACTAGTATCAAGAGAGAGTTTGCTTTGGATCCTGCAAGGGACATCATCATAGCGTATATGCAGAACGGTGAGACATTGACGCCGGATCATGGTTTTCCGGTGAGGATTATCATACCGGGTTTTATTGGTGGCCGTATGGTCAAGTGGCTTAAGCGTATTATTGTCACACCTCAAGAATCGGACAATTATTACCATTACAAGGATAACAGAGTACTTCCCTCCCATGTCGATGCCGAGCTAGCCAACTCTGAAGCTTGGTGGTACAAGCCTGAGTACATAATAACGGAGCTTAACATAAACTCAGTGATAACGACGCCCTGTCACGAGGAGATATTGCCCATAAACTCGTGGACTACTCAGAGGCCCTATGTGTTGAAGGGATATGCATATTCCGGGGGAGGGAGGAAGGTGACACGTGTGGAGGTGACATTGAATGGCGGGGAAACGTGGGCAGTGGCGACGTTAGAGCACACAGAAAAGCCAAACAAGTACGGAAAATACTGGTGCTGGTGTTTCTGGTCGCTGGAGGTGGAGGTGTTGGATCTTCTGGGGGCTAAGGAAATCGCCGTCAGAGCATGGGACGAGGCCCTCAACACCCAACCAGAGAAGCTCATTTGGAATGTCATGGGTATGATGAACAATTGCTGGTTCAAAGTGAAAACAAACGTGTGCAGGCCCCACAAAGGGGAAATTGGAATAGTGTTTGAGCACCCAACCTTACCGGGGAACAAATCAGGTGGGTGGATGTCCAAGGAAAGACACCTGGAGCAGACGTCAGAATCAAACCAAACCCTCAAGAAGAGTGTCTCAACACCATTCATGAACACAACCTCAAATAAGTACTCTGCCTCTGAAGTCAAAAAACACTCTTCCCCTGACTCTGCCTGGATCATCGTCCACGGCCAAGTCTATGACTGCACACGTTTCCTTAAAGACCATCCTGGTGGCACCGACAGCATCCTCATTAACGCCGGCACCGACTGTACCGAAGAGTTCGAAGCCATACATTCCGACAAGGCCAAGAAAATGCTCGAAGAATACCGAATCGGAGAGCTCGTAACCTCCGGCTCCGGCTCCGGCTCCGGCTCCACCGACTCGTCGCCCAACTCCTCCGTACACGGCAACGGCCAACTCAAACAACTAACACCTATCACTGAAGCCCCACCGTTACGTACCGTGGCCCTCAAGCCACGTGAAAAAACCCCATGCAAGCTTGTCTCCAAAACGTCCCTCTCTCATGACGTCAGACTTTTCCGTTTTGCACTTCCCTCCGAAGACCAAGTCTTGGGACTTCCGGTAGGAAAGCACATATTTGTGTGCGCTACCATTGAGGATAAGTTGTGCATGCGAGCTTACACTCCAACCAGCACCGTTGATGTGGTGGGGTATTTTGATCTAGTGGTCAAGATTTATTTCAAAGGTGTGCATCCAAAGTTCCCCAATGGTGGTCTCATGTCACAGCACTTGGACTCGCTTCCCATTGGTTCGTTCGTGGAAGTGAAGGGCCCACTGGGCCATATAGAGTACTCTGGAAGGGGTCAGTTTTTGGTTCACGGAAAGCCCAGGTTTGGGAAGAGGCTAGCCATGTTGGCAGGTGGGACCGGGATCACGCCGGTTTATCAGGTGGCTCAAGCCATTTTGAAGGACCCAGAGGACCGGACCGAGATGCACGTTGTGTATGCGAACCGAACCGAGGATGATATATTGTTGAGAGAAGAGATGGATGAGTGGGCGAAGAAGGATGAGCGGTTCAAGGTATGGTATGTGGTTCAAGAGAGCAAGGAAGGGTGGGAGTACAGTGTGGGCTTCGTCACTGAAGATATCCTGAGGGAGCATGCACCCGCGGCATCTGATGACACGTTGGCATTGGCTTGTGGGCCACCACCCATGATTCAGTTTGCCGTGCAGCCCAATTTGGAGAAAATGGGGTATGACATCAAGAACAATCTGCTTGTGTTTTAG 2691 0.5165 MAASIDNRQYAVPLNGVNRSFNGVSPHFNFQPPNLKRSSEPFSMDFDSSSEDENDADELKALMRKANSEVESSIFDPRDDGTSDSWIQRNASMVRLTGKHPFNSEPPLTRLMHHGFITPVPLHYVRNHGSVPKATWDDWVVEVCGLVKRPAKFTMDQLVNEFPTREMPVTLVCAGNRRKEQNMVKQSIGFNWGAAAISTTVWKGVPLRYLLKRCGIYSRTKGALHVCFEGAEDLPGGGGSKYGTSIKREFALDPARDIIIAYMQNGETLTPDHGFPVRIIIPGFIGGRMVKWLKRIIVTPQESDNYYHYKDNRVLPSHVDAELANSEAWWYKPEYIITELNINSVITTPCHEEILPINSWTTQRPYVLKGYAYSGGGRKVTRVEVTLNGGETWAVATLEHTEKPNKYGKYWCWCFWSLEVEVLDLLGAKEIAVRAWDEALNTQPEKLIWNVMGMMNNCWFKVKTNVCRPHKGEIGIVFEHPTLPGNKSGGWMSKERHLEQTSESNQTLKKSVSTPFMNTTSNKYSASEVKKHSSPDSAWIIVHGQVYDCTRFLKDHPGGTDSILINAGTDCTEEFEAIHSDKAKKMLEEYRIGELVTSGSGSGSGSTDSSPNSSVHGNGQLKQLTPITEAPPLRTVALKPREKTPCKLVSKTSLSHDVRLFRFALPSEDQVLGLPVGKHIFVCATIEDKLCMRAYTPTSTVDVVGYFDLVVKIYFKGVHPKFPNGGLMSQHLDSLPIGSFVEVKGPLGHIEYSGRGQFLVHGKPRFGKRLAMLAGGTGITPVYQVAQAILKDPEDRTEMHVVYANRTEDDILLREEMDEWAKKDERFKVWYVVQESKEGWEYSVGFVTEDILREHAPAASDDTLALACGPPPMIQFAVQPNLEKMGYDIKNNLLVF 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2344 896 Pfam Oxidoreductase molybdopterin binding domain 128 307 IPR000572 -
Mibi08g2344 896 SUPERFAMILY Riboflavin synthase domain-like 634 753 IPR017938 -
Mibi08g2344 896 PRINTS Cytochrome B5 signature 546 556 IPR001199 -
Mibi08g2344 896 PRINTS Cytochrome B5 signature 556 570 IPR001199 -
Mibi08g2344 896 PRINTS Cytochrome B5 signature 571 578 IPR001199 -
Mibi08g2344 896 PRINTS Cytochrome B5 signature 583 595 IPR001199 -
Mibi08g2344 896 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 840 856 IPR001709 GO:0016491
Mibi08g2344 896 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 693 700 IPR001709 GO:0016491
Mibi08g2344 896 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 771 790 IPR001709 GO:0016491
Mibi08g2344 896 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 797 806 IPR001709 GO:0016491
Mibi08g2344 896 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 809 820 IPR001709 GO:0016491
Mibi08g2344 896 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 864 872 IPR001709 GO:0016491
Mibi08g2344 896 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 555 565 IPR001709 GO:0016491
Mibi08g2344 896 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 521 596 IPR001199 -
Mibi08g2344 896 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 77 337 IPR036374 -
Mibi08g2344 896 FunFam Nitrate reductase [NADH] 748 896 - -
Mibi08g2344 896 FunFam NADH-cytochrome b5 reductase 632 747 - -
Mibi08g2344 896 SMART Cyt_b5_2 524 596 IPR001199 -
Mibi08g2344 896 FunFam Nitrate reductase 80 329 - -
Mibi08g2344 896 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 145 180 IPR022407 GO:0043546
Mibi08g2344 896 CDD eukary_NR_Moco 79 464 - -
Mibi08g2344 896 Pfam Cytochrome b5-like Heme/Steroid binding domain 526 595 IPR001199 -
Mibi08g2344 896 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 520 598 IPR036400 -
Mibi08g2344 896 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 552 559 IPR018506 GO:0020037
Mibi08g2344 896 Gene3D - 518 599 IPR036400 -
Mibi08g2344 896 PRINTS Cytochrome B5 reductase signature 693 700 - -
Mibi08g2344 896 PRINTS Cytochrome B5 reductase signature 864 872 - -
Mibi08g2344 896 PRINTS Cytochrome B5 reductase signature 771 790 - -
Mibi08g2344 896 PRINTS Cytochrome B5 reductase signature 809 820 - -
Mibi08g2344 896 PRINTS Cytochrome B5 reductase signature 672 683 - -
Mibi08g2344 896 PRINTS Cytochrome B5 reductase signature 738 752 - -
Mibi08g2344 896 PANTHER SULFITE REDUCTASE 57 468 - -
Mibi08g2344 896 Gene3D - 339 515 - -
Mibi08g2344 896 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 641 753 IPR017927 GO:0016491
Mibi08g2344 896 Pfam Oxidoreductase NAD-binding domain 772 878 IPR001433 GO:0016491
Mibi08g2344 896 MobiDBLite consensus disorder prediction 32 56 - -
Mibi08g2344 896 FunFam Nitrate reductase 339 515 - -
Mibi08g2344 896 Pfam Oxidoreductase FAD-binding domain 646 752 IPR008333 -
Mibi08g2344 896 Gene3D Translation factors 633 747 - -
Mibi08g2344 896 CDD cyt_b5_reduct_like 646 896 - -
Mibi08g2344 896 FunFam Sulfite oxidase, mitochondrial 519 600 - -
Mibi08g2344 896 MobiDBLite consensus disorder prediction 597 625 - -
Mibi08g2344 896 MobiDBLite consensus disorder prediction 596 626 - -
Mibi08g2344 896 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 741 891 IPR039261 -
Mibi08g2344 896 Pfam Mo-co oxidoreductase dimerisation domain 335 466 IPR005066 GO:0016491|GO:0030151
Mibi08g2344 896 SUPERFAMILY E set domains 339 466 IPR014756 -
Mibi08g2344 896 PRINTS Eukaryotic molybdopterin domain signature 253 269 IPR008335 GO:0016491
Mibi08g2344 896 PRINTS Eukaryotic molybdopterin domain signature 382 394 IPR008335 GO:0016491
Mibi08g2344 896 PRINTS Eukaryotic molybdopterin domain signature 434 446 IPR008335 GO:0016491
Mibi08g2344 896 PRINTS Eukaryotic molybdopterin domain signature 368 382 IPR008335 GO:0016491
Mibi08g2344 896 PRINTS Eukaryotic molybdopterin domain signature 180 192 IPR008335 GO:0016491
Mibi08g2344 896 PRINTS Eukaryotic molybdopterin domain signature 286 299 IPR008335 GO:0016491
Mibi08g2344 896 PRINTS Eukaryotic molybdopterin domain signature 337 349 IPR008335 GO:0016491
Mibi08g2344 896 PRINTS Eukaryotic molybdopterin domain signature 195 210 IPR008335 GO:0016491
Mibi08g2344 896 PRINTS Eukaryotic molybdopterin domain signature 447 460 IPR008335 GO:0016491
Mibi08g2344 896 PRINTS Eukaryotic molybdopterin domain signature 116 132 IPR008335 GO:0016491
Mibi08g2344 896 PRINTS Eukaryotic molybdopterin domain signature 169 180 IPR008335 GO:0016491
Mibi08g2344 896 PRINTS Eukaryotic molybdopterin domain signature 409 419 IPR008335 GO:0016491
Mibi08g2344 896 PRINTS Eukaryotic molybdopterin domain signature 94 108 IPR008335 GO:0016491
Mibi08g2344 896 PRINTS Eukaryotic molybdopterin domain signature 270 283 IPR008335 GO:0016491
Mibi08g2344 896 PIRSF Nitr_rd_NADH 18 895 IPR012137 GO:0006809|GO:0042128|GO:0050464
Mibi08g2344 896 Gene3D - 98 338 IPR036374 -
Mibi08g2344 896 Gene3D - 748 896 IPR039261 -
Mibi08g2344 896 Coils Coil 49 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2344 Mibi-ChrMibi08 41152048 41155492 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2344 634 887 NADPH P450 reductases AT5G17770 42.188 6.23e-55 190