Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2299 ATGGCAGCTACAATGGATTTCTACAGTAGCGGATCCGTTTGCCTTCATTCAGATCCCTTCAGGGGTGAGTTGATGGAAGTTCTTGAACCTTTTATGAAAAGTCCTTCCTCCCCAACCTCATCCCCTTCCTCAAACTCCTCTCTCCCTTCCACATCTTACTCTCCCTCTTCTTCCCCCAATTCCTTCCTATCCTCTCCATCATTCCCTTCAAACCCCCCCACATCGATGACCCCTATATTTGCCCATGGGTTTTCCTTCGGGCAACCAAGCTCCCTTCTGGGCCTCAACCACCTAACCCCATCTCAGATCAACCAGATCCAAGCCCAGATCCAGTTTCAGAACCATCAAAACCTGGGCCTGGGCTGGCACCAAAACAGAACCACCACCACCACCTCCACACTCGGCTTCTTGGGACCAAAACCTATTCCCATGAAGCATGCGGGTGTTCCTCCCAAACCCACCAAGCTGTACCGTGGTGTGAGGCAGCGTCACTGGGGGAAGTGGGTGGCCGAGATCAGACTCCCCAAGAACCGTACGAGGCTCTGGCTCGGTACCTTCGATACCGCCGAGGAAGCTGCCTTAGCCTATGACAAGGCCGCTTACAAGCTCAGAGGTGACTTCGCTAGGCTCAATTTCCCCAACCTCCGACATGAAGGTTCTTGTGTTGGCGGTGAATTTGGGGAGTACAAGCCGCTTCACTCCTCTGTTGATGCTAAGCTTGAAGCGATCTGTGAAAGCTTGGCCGATCTGCAGAAGCAGGGGAAGTCCACCAAGAGGTCGAAGGCGGCGGCGAAGGCGAAGGCTTCCAAGGACGCTCAGCCGGAGGTGAAGGTCGAAAGCGCGACGTCGCCGGAGAGTGAGGGGTCCGGTGGATCCTCTCCTCTGTCGGATCTGACTTTTGCGGATGTGGGCGAGCCACAGTGGGATGGGGCTTTGGATAATCTGAATCTGGAGAAGTACCCTTCATATGAGATTGATTGGGCATCACTGTGA 993 0.5438 MAATMDFYSSGSVCLHSDPFRGELMEVLEPFMKSPSSPTSSPSSNSSLPSTSYSPSSSPNSFLSSPSFPSNPPTSMTPIFAHGFSFGQPSSLLGLNHLTPSQINQIQAQIQFQNHQNLGLGWHQNRTTTTTSTLGFLGPKPIPMKHAGVPPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHEGSCVGGEFGEYKPLHSSVDAKLEAICESLADLQKQGKSTKRSKAAAKAKASKDAQPEVKVESATSPESEGSGGSSPLSDLTFADVGEPQWDGALDNLNLEKYPSYEIDWASL 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2299 330 Gene3D AP2/ERF domain 156 214 IPR036955 GO:0003700|GO:0006355
Mibi08g2299 330 MobiDBLite consensus disorder prediction 255 302 - -
Mibi08g2299 330 FunFam Ethylene-responsive transcription factor 2 155 214 - -
Mibi08g2299 330 MobiDBLite consensus disorder prediction 279 296 - -
Mibi08g2299 330 Pfam AP2 domain 157 205 IPR001471 GO:0003700|GO:0006355
Mibi08g2299 330 PRINTS Ethylene responsive element binding protein signature 179 195 IPR001471 GO:0003700|GO:0006355
Mibi08g2299 330 PRINTS Ethylene responsive element binding protein signature 157 168 IPR001471 GO:0003700|GO:0006355
Mibi08g2299 330 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 4 330 - -
Mibi08g2299 330 MobiDBLite consensus disorder prediction 31 69 - -
Mibi08g2299 330 ProSiteProfiles AP2/ERF domain profile. 156 213 IPR001471 GO:0003700|GO:0006355
Mibi08g2299 330 MobiDBLite consensus disorder prediction 33 69 - -
Mibi08g2299 330 SUPERFAMILY DNA-binding domain 156 214 IPR016177 GO:0003677
Mibi08g2299 330 CDD AP2 155 215 IPR001471 GO:0003700|GO:0006355
Mibi08g2299 330 SMART rav1_2 156 219 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2299 Mibi-ChrMibi08 40732936 40733928 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2299 1 330 AP2-EREBP Transcription Factor Family AT1G78080 53.315 3.05e-103 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi08g2299 AP2 7.3e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2299 08 40732936 40733928 Mibi05g0416 05 4005921 4006985 CCT