Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2296 ATGTATGAATTTAGCTTTAGAAGACTCCGTCAGCTCTGTGTAATTTCATATCAAAACCTGATGACGAACCAGAATGTGATGGCCCCTGATTTGAAATCACAAATTAATTCCGTGATTGCGATGTTGATGTCGATTTCAAATTCGCATGCTTTTCTCGGAGCAGGAGTGCCGGATCCTATGGCTGTGCTTCGTGAGTTTCTGATGGGGACATCCCAGAAGAAGTTCATGAAAAGGATTAAGGATGGAGAAGGTAAGGTTACCTCCTGGATTGATTCAATGAGAGCTTCCTCTCCTCCCCGAGTCAAATCCACAGTCCATGATTGTAAAAACTCAGACCTTCATCATCCTTCAGCTCTCAACGTGTTTGATCAGATAATATATAAAGCAAGAGGAAAAAAGATCATAACCTTTCTTGACTATGATGGAACTCTCTCCCCGATTGTTACAGACCCCGAGAAAGCATTCATGACAGAAAAGATGAGAGAAACTGTGAAGGACACAGCCAGATATTTTCCCACAGCCATCGTGACTGGGAGGTGCATTGACAAGGTATATAACTTTGTAAGACTTGCAGAACTGTACTACGCAGGAAGCCATGGCATGGACATCAAGGGGCCAACGAAAACACGAAACTCTGAGAAAGGTAAAAGAGCTGTCCTCTTCCAACCTGCGAATCAGTTCTTACCTATGATCAACGAGGTGTATAAAATCTTGGTAGAAAAAACAAAGTCTGTTCCGGGGGCTGTGGTAGAGAACAACAAGTTCTGCTTGTCCGTTCACTTCCGTTGTGTTGAGGAGAAGAGTTGGGGTGCATTGGCAGAGCAAGTAAGATCAGTGCTCAACGATTATCCAAAACTTAGACTTACTCAAGGAAGAAAAGTTCTAGAGATCCGCCCAAACATCAAGTGGGACAAAGGCAAAGCTCTCGAGTTTTTGTTGAGCTCATTAGGATATGCAAAGTCTCAAGACGTGTTTCCTATTTATATTGGTGATGACCGAACTGACGAGGATGCTTTCAAGGTTTTACGCAACAGAGGTCAAGGGGTTGGGATTTTAGTGTCTAAAGTACAAAGAGAAACAGAGGCTTCCTACACTCTGCAAGATCCAGCAGAAGTTGAGCAGTTTCTACGGCGTTTGGTGGAATGGAAGAGAAGGAGGGTGAATCCAATTACAAGTGTAGAGACTTGTAGATTGTAG 1197 0.4327 MYEFSFRRLRQLCVISYQNLMTNQNVMAPDLKSQINSVIAMLMSISNSHAFLGAGVPDPMAVLREFLMGTSQKKFMKRIKDGEGKVTSWIDSMRASSPPRVKSTVHDCKNSDLHHPSALNVFDQIIYKARGKKIITFLDYDGTLSPIVTDPEKAFMTEKMRETVKDTARYFPTAIVTGRCIDKVYNFVRLAELYYAGSHGMDIKGPTKTRNSEKGKRAVLFQPANQFLPMINEVYKILVEKTKSVPGAVVENNKFCLSVHFRCVEEKSWGALAEQVRSVLNDYPKLRLTQGRKVLEIRPNIKWDKGKALEFLLSSLGYAKSQDVFPIYIGDDRTDEDAFKVLRNRGQGVGILVSKVQRETEASYTLQDPAEVEQFLRRLVEWKRRRVNPITSVETCRL 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2296 398 Gene3D - 235 391 IPR023214 -
Mibi08g2296 398 Gene3D - 134 220 IPR023214 -
Mibi08g2296 398 Pfam Trehalose-phosphatase 137 369 IPR003337 GO:0003824|GO:0005992
Mibi08g2296 398 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 137 344 IPR006379 -
Mibi08g2296 398 CDD HAD_TPP 137 372 - -
Mibi08g2296 398 SUPERFAMILY HAD-like 137 383 IPR036412 -
Mibi08g2296 398 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 70 387 IPR044651 GO:0004805|GO:0005992
Mibi08g2296 398 FunFam Trehalose 6-phosphate phosphatase 230 388 - -
Mibi08g2296 398 TIGRFAM T6PP: trehalose-phosphatase 132 380 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2296 Mibi-ChrMibi08 40702830 40706004 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2296 126 379 Trehalose Biosynthesis Gene Families AT1G70290 26.007 2.39e-09 57.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2296 08 40702830 40706004 Mibi05g0418 05 4017994 4019931 CCT