Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2288 ATGAGCATGGTTTCAGTTTTTGAGGTTTTCCAGGAGAAGCAAGCATGATATTATCATAATATATCAGAAGCGTCTTCCTTGCTTGCCTTGCGCTGTCTGTATCTCCGAAAGGCTAAAACCCTAGCCAAGCCAAGTCTGCCATTATCGCTCGCTCAACCTCCAAATATGTCGCACTTTGGAAGATCTGGTCCTCCTGACATCAGAGACACCTATTCCCTTCTCGTCCTCAACATCACTTTCCGTACAACCGCTGACGATCTCTACCCCCTTTTTGACAAGTACGGCAAGGTTGTGGATGTCTTCATCCCCAGGGACCGAAGGACTGGTGAATCACGAGGCTTCGCTTTTGTTCGTTATAAGTATGCCGACGAGGCTCAGAAGGCTGTAGATAAGCTCGATGGAAGAGTGGTTGATGGAAGAGAAATTATGGTTCAATTCGCTAAATACGGACCTAATGCTGAGAAAATTCAAAAGGGCAGGATAGTGGAAACATCCTCCAAGCCAAGAGGGAGGTCAAAAAGCCGCAGCCCTCGTCCTAGGCACAGGGATGAATATAGAGACAGGGACTACAGGAGGAGAAGTCGCAGTAGGAGTAGGGAAAGATATGATCGTGACAAGTATCGTGAAAGGGATAGGGATTATCGTCGCCGGAGTAGGAGTCGCAGTGCAAGTCCTGATCGGCGTAAAGATCGTAGGAGAGGAAGAGATGACGAGGAGAGAAGAACTCGAAGCAGATCAGTTGATAGTGCTTCGCCTGCTCAGCATAGCTCCAGTCCTCGTAGAAGTCCAACTCCACGTAGGAGGTCTTCTCCAGATGAGCGGCATGATGAACGGAATAGTCATGAGCAATCACCGGCTCAGAAGGATGTTTCACCCCATGATCGTCCTGTTGATTCTCGAAGCCCATCTCACAAATCTGATGCTGATGAATGA 933 0.4834 MSMVSVFEVFQEKQAXYYHNISEASSLLALRCLYLRKAKTLAKPSLPLSLAQPPNMSHFGRSGPPDIRDTYSLLVLNITFRTTADDLYPLFDKYGKVVDVFIPRDRRTGESRGFAFVRYKYADEAQKAVDKLDGRVVDGREIMVQFAKYGPNAEKIQKGRIVETSSKPRGRSKSRSPRPRHRDEYRDRDYRRRSRSRSRERYDRDKYRERDRDYRRRSRSRSASPDRRKDRRRGRDDEERRTRSRSVDSASPAQHSSSPRRSPTPRRRSSPDERHDERNSHEQSPAQKDVSPHDRPVDSRSPSHKSDADE 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2288 310 MobiDBLite consensus disorder prediction 157 310 - -
Mibi08g2288 310 MobiDBLite consensus disorder prediction 177 246 - -
Mibi08g2288 310 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 71 149 IPR000504 GO:0003723
Mibi08g2288 310 MobiDBLite consensus disorder prediction 265 310 - -
Mibi08g2288 310 Gene3D - 51 160 IPR012677 -
Mibi08g2288 310 SMART rrm1_1 72 145 IPR000504 GO:0003723
Mibi08g2288 310 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 73 142 IPR000504 GO:0003723
Mibi08g2288 310 MobiDBLite consensus disorder prediction 247 264 - -
Mibi08g2288 310 FunFam Serine/arginine-rich splicing factor SC35 59 158 - -
Mibi08g2288 310 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 69 295 - -
Mibi08g2288 310 SUPERFAMILY RNA-binding domain, RBD 54 157 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2288 Mibi-ChrMibi08 40612243 40616091 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2288 69 147 Eukaryotic Initiation Factors Gene Family AT3G11400 37.975 3.21e-10 58.5