Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2272 ATGTCTCTCCATCAGTCCAGCACTCCCCCAGCTTCTCACATAACTTCTCTCCGTTCTTTCCAAAGGGCAAAGGCTATGGATGCTGATATTGTTGAAGTTTACCGCAGATACGCGCGTAAGGTTTGCCCAGTGAATTACTCACTTTGTCCCGATGATGTGCCTGATCCTAATGGTGATCCCTACTTCACTCTGACATTCATCAGAAATGAACTATACTTTGAATTTACAAGCATGGACCTTAATAGTGATAAGAGCAATGCTCTGAGTCAGCCTATTCGTAGGGTCAAAGAGCATCGAATAGGTCTGATAACAGATGCTGCTTTATCTGCTTTTGGTATCCCTAAACCTGATCGCAACACCATGGCAGCCAAGGTCATGGAAGTTGCAAGGAACATGCTTAATGATACACACAGGAACGACAAGATTTTGAAGATGGATGTTCATGTTGATGTTTTTATTCATTACTATGACACTTATAGTCCAACTGTGGAGGCATCTATGGAGGAACATGGCCACAATAATGGGCTGGTGGCTGCCAGTGATCCATCCGTTGAGGCATTGGAAAGAGTTGATCTTGAGCAAGTACAGGGATTACCTCATTGTGTGATATGCTTGGGAGTTTTCAAGGTCGGAAGAGAAATTATTCGCATGCCTTGCTCACATACCTTTCATGGAGACTGCATTGTTCATTGGTTGCATCGCAAGAATGAATGTCCCTTGTCACTACAAAAAAATATGACACTAGTCACGGTTCAAATTGGAAGTTTGTCACGGTTTTGA 780 0.4308 MSLHQSSTPPASHITSLRSFQRAKAMDADIVEVYRRYARKVCPVNYSLCPDDVPDPNGDPYFTLTFIRNELYFEFTSMDLNSDKSNALSQPIRRVKEHRIGLITDAALSAFGIPKPDRNTMAAKVMEVARNMLNDTHRNDKILKMDVHVDVFIHYYDTYSPTVEASMEEHGHNNGLVAASDPSVEALERVDLEQVQGLPHCVICLGVFKVGREIIRMPCSHTFHGDCIVHWLHRKNECPLSLQKNMTLVTVQIGSLSRF 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2272 259 ProSiteProfiles Zinc finger RING-type profile. 201 240 IPR001841 -
Mibi08g2272 259 SUPERFAMILY RING/U-box 200 240 - -
Mibi08g2272 259 Pfam Ring finger domain 200 240 IPR001841 -
Mibi08g2272 259 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 165 246 IPR013083 -
Mibi08g2272 259 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 101 240 - -
Mibi08g2272 259 SMART ring_2 201 241 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2272 Mibi-ChrMibi08 40453178 40453957 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2272 187 240 C3H Transcription Factor Family AT4G12190 44.262 1.35e-10 54.7