Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2269 ATGGCTAATCACCGATCCCAGTTCGGAGACACCACATTGACCAAAGTGTTCGTGGGAGGACTTGCTTGGGAGACTCCCACTGAAGAAATGCGTAAATATTTTCAGCAATTCGGTCATATTCTTGAAGCCGTCATCATCAAGGATAAGCACACTGGAAAGTCTAAAGGCTATGGATTCGTATGCCCTTTACCCCATTTATCTCCTTTTCTTTCTCTTCATCAAGACCAATTAAGTGTCAGATTTTTATTGTATTATATATCGTTCAATGAGCAGGTCACTTTCCGTGATCCAGACTCAGCAAGAAAAGCATGTGCTGATCCCAAGCCAATGATCTATGGAAGAGGAGCAAATTGCAATATTGCTTCCCTAGGACGACCCCCACCCCAACCTCAATCTCCTCGAGGAACGAATGATGGTGGTAAAGAATTCACAGTAGGAGAAACGCCGGCCAACAATGGAGTTCCGGCTCTGATGTACTCAGCAGCGTATAGGTGA 495 0.4485 MANHRSQFGDTTLTKVFVGGLAWETPTEEMRKYFQQFGHILEAVIIKDKHTGKSKGYGFVCPLPHLSPFLSLHQDQLSVRFLLYYISFNEQVTFRDPDSARKACADPKPMIYGRGANCNIASLGRPPPQPQSPRGTNDGGKEFTVGETPANNGVPALMYSAAYR 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2269 164 MobiDBLite consensus disorder prediction 122 149 - -
Mibi08g2269 164 Gene3D - 2 142 IPR012677 -
Mibi08g2269 164 CDD RRM_RBM24_RBM38_like 14 121 - -
Mibi08g2269 164 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 14 60 IPR000504 GO:0003723
Mibi08g2269 164 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 16 60 IPR000504 GO:0003723
Mibi08g2269 164 SUPERFAMILY RNA-binding domain, RBD 9 60 IPR035979 GO:0003676
Mibi08g2269 164 SMART rrm1_1 15 80 IPR000504 GO:0003723
Mibi08g2269 164 PANTHER BOULE-RELATED 92 136 IPR037366 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2269 Mibi-ChrMibi08 40401405 40402030 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2269 10 122 C2H2 Transcription Factor Family AT2G19380 28.319 1.20e-10 57.0