Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2251 ATGGCACTTGAAGCTGTGGTGTTCCCACAAGATCCATTCAACTATAGCTATATGTATGGACTTGGTTATGGTTTAGAAACAGAACAAGACAGAGACTTTGTTGGGATCACAGGGGATACGAATTGGGATTACTCTTCAGTGATGCAAGACGTAGTGAAGGAATCATTGGACAGTTCAAACTCGTCTCCACAACAATCTGCTTCCACAGGAGGACGCAGGAAACGGCGTCGTACCAAGCCAACCAAGAACCAGGAAGAAATCGAGAGCCAGAGGATGACCCACATTGCTGTTGAGCGTAATCGCCGGAAACAGATGAATGAATACTTGGCCATACTCCGATCATTGATGCCTCCTTCTTACGTTCAAAGGGGCGACCAAGCTTCTATAATTGGAGGCGCCATTAACTTCGTAAAGGAGCTAGAACAACATCTACAGTCGATGCAGGGGCAAACCAAAACAAATCCACGCTCACTAAACAACCCTTTTGCTGAATTCTTCACGTTCCCACAGTTCACGACGCCGGCAACTCATGGCGGAGCCGGCTGTACGGCGGCGGCGAACGACGCCGTGATGAGACAAAGCCAGAAGGAGGTAGGGGCGGCCGACATAGAAGTGAGTTTAGTAGACAGCCACGCCAACCTTAAAATTCTCTCAAAGAAACGACCAGGTCAACTTGTGAAGATGGTGATTGGGCTTCAGAGTCTCAGACTCTGCATTCTTCATCTTAATGTTACTACCACTCTCGATGATATGGTTCTTTATTCTGTTAGCGTAAAGGTTGAGGATGAGAATCAGTTGAATACAGTAGATGAAATTGCAGCTGCTGTGAATCAAATAATGCGCAGAATTGAAGAAGAAGCTGCTTTCTGTTGA 873 0.4651 MALEAVVFPQDPFNYSYMYGLGYGLETEQDRDFVGITGDTNWDYSSVMQDVVKESLDSSNSSPQQSASTGGRRKRRRTKPTKNQEEIESQRMTHIAVERNRRKQMNEYLAILRSLMPPSYVQRGDQASIIGGAINFVKELEQHLQSMQGQTKTNPRSLNNPFAEFFTFPQFTTPATHGGAGCTAAANDAVMRQSQKEVGAADIEVSLVDSHANLKILSKKRPGQLVKMVIGLQSLRLCILHLNVTTTLDDMVLYSVSVKVEDENQLNTVDEIAAAVNQIMRRIEEEAAFC 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2251 290 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 89 140 IPR011598 GO:0046983
Mibi08g2251 290 PANTHER MAX DIMERIZATION, MAD 58 287 - -
Mibi08g2251 290 MobiDBLite consensus disorder prediction 54 69 - -
Mibi08g2251 290 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 89 158 IPR036638 GO:0046983
Mibi08g2251 290 MobiDBLite consensus disorder prediction 54 88 - -
Mibi08g2251 290 Pfam Helix-loop-helix DNA-binding domain 90 141 IPR011598 GO:0046983
Mibi08g2251 290 Gene3D - 73 156 IPR036638 GO:0046983
Mibi08g2251 290 CDD bHLH_AtFAMA_like 92 154 - -
Mibi08g2251 290 SMART finulus 95 146 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2251 Mibi-ChrMibi08 40250178 40251263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2251 1 260 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 50.163 4.47e-79 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi08g2251 HLH 3.7e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2251 08 40250178 40251263 Mibi05g0460 05 4386999 4388201 CCT
Mibi08g2251 08 40250178 40251263 Mibi08g2251 08 40250178 40251263 ECH