Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2241 ATGCGAAGGTTTAGTTGGTTAACGCCGTGTCGGCGTCGAGTGCTTGCACCTAAGGCTTTGGAACCTCCCGTTGATCAAGGAAAGTCCATGAGTAAATTGTTGTCCTTTGGCCAATCGTTGTCTATCAGACGAGCTTTGATGAGCTGCAATTTCGCCAAAAGAAATGACCAGTTGGGAATTTCAAGACTACCTTTAAATTTTCGCTATATTCATGCCACAGCGTTTCTTTCATCTATTGAACGAGACTACTATCAAATTCTTGGTGTTCCAGAAAATGCCAGTCAGGACGATATCAAGAAGGCCTTTCACAGACTTGCCAAGAAATACCATCCTGATGCAAATAAGAACAATCCATCTGCCAAGAGGAAATTTCAAGATATAAGAGAAGCTTATGAGACCTTGAGAGATTCTAAAAAGAGGGCACAGTTTGACAGGATGCGTACTTCCAATTCTGAGAACATAGAATATGAACCGGATGCTGAAGAACGGTTTAGAAATGCTTATCGGGCTCACTTTTCTGATTCGTTTCATAAAGTCTTCTCTGAGATATTTGAAGAAGCGACCACTCATTCTGCATCAAATATTGAGGTTGAGATATCGCTTTCTTTCTTAGAAGCTGTTAAGGGGTGCACCAAACGTGTGTCTTTTGATGCAGTTGTTCCCTGTGATTTTTGTGATGGGCGAGGCTATTCACACAATGCAAAGGCAACTGTTTGTCCAACGTGCAGGGGCGTAGGCAGAGTTACAATCCCTCCATTTACATCAACATGCATCACTTGTAGAGGATCAGGCCGAGTCATCAAGGACCATTGTAAATCTTGTGGAGGATCTGGGGTGGTAGAAGGCATCAAAGAGGTTAAAGTTACTGTACCAGCAGGTGTGGATTCAGGAGATACAATTCATGTGCCAGAAGCTGGCCATGCTGCTGGACGTGGAGGTCGACCAGGAAGTCTATATATAAGAATAAAGGTGGCTAAGGATCCTGTTTTTGCCAGAGATGGTGCAGATATATATGTGGAGTCTAACATCAGCTTTACACAAGCTATTCTTGGTGGTGAAGTTGAGGTACCTACTTTATTAGGGAAGACTCTTGTAAAAATACCTAAGGGTGTTCAACCAGGACAGCTTCTGATATTAAGAGGCAAAGGACTTCCAAAGCATGGTTTTCTTGTAGACCATGGAGATCAGTTTGTGCGCTTCCGTATTAACTTCCCTACTGTAATTAATGAACGGCAACGAGCCATTCTAGAAGAACTTGCAAAGGAGGAAATAAAGGAGGGATACAATTCACAGATTGAAGAAAACTGGTGGCAGCAAATTCTCGGATACATGATGGGTCCAAAGTTTATGTTGGAACTATCCGTGCTGATGTTAATTCTCCTCCTCATCAATAAATTGTTGGGCTGA 1407 0.425 MRRFSWLTPCRRRVLAPKALEPPVDQGKSMSKLLSFGQSLSIRRALMSCNFAKRNDQLGISRLPLNFRYIHATAFLSSIERDYYQILGVPENASQDDIKKAFHRLAKKYHPDANKNNPSAKRKFQDIREAYETLRDSKKRAQFDRMRTSNSENIEYEPDAEERFRNAYRAHFSDSFHKVFSEIFEEATTHSASNIEVEISLSFLEAVKGCTKRVSFDAVVPCDFCDGRGYSHNAKATVCPTCRGVGRVTIPPFTSTCITCRGSGRVIKDHCKSCGGSGVVEGIKEVKVTVPAGVDSGDTIHVPEAGHAAGRGGRPGSLYIRIKVAKDPVFARDGADIYVESNISFTQAILGGEVEVPTLLGKTLVKIPKGVQPGQLLILRGKGLPKHGFLVDHGDQFVRFRINFPTVINERQRAILEELAKEEIKEGYNSQIEENWWQQILGYMMGPKFMLELSVLMLILLLINKLLG 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2241 468 Hamap Chaperone protein DnaJ [dnaJ]. 79 435 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Mibi08g2241 468 SMART dnaj_3 81 139 IPR001623 -
Mibi08g2241 468 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 46 423 - -
Mibi08g2241 468 SUPERFAMILY Chaperone J-domain 81 180 IPR036869 -
Mibi08g2241 468 SUPERFAMILY HSP40/DnaJ peptide-binding domain 194 325 IPR008971 GO:0006457|GO:0051082
Mibi08g2241 468 CDD DnaJ 82 136 IPR001623 -
Mibi08g2241 468 Gene3D - 193 323 - -
Mibi08g2241 468 Pfam DnaJ domain 82 144 IPR001623 -
Mibi08g2241 468 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 209 280 IPR036410 -
Mibi08g2241 468 Gene3D DnaJ domain 79 192 IPR036869 -
Mibi08g2241 468 Gene3D - 326 436 - -
Mibi08g2241 468 CDD DnaJ_C 193 406 - -
Mibi08g2241 468 FunFam Chaperone protein dnaJ 1, mitochondrial 325 432 - -
Mibi08g2241 468 Pfam DnaJ C terminal domain 195 405 IPR002939 -
Mibi08g2241 468 SUPERFAMILY HSP40/DnaJ peptide-binding domain 329 416 IPR008971 GO:0006457|GO:0051082
Mibi08g2241 468 CDD DnaJ_zf 222 278 IPR001305 GO:0031072|GO:0051082
Mibi08g2241 468 ProSitePatterns Nt-dnaJ domain signature. 124 143 IPR018253 -
Mibi08g2241 468 Pfam DnaJ central domain 222 278 IPR001305 GO:0031072|GO:0051082
Mibi08g2241 468 ProSiteProfiles dnaJ domain profile. 82 147 IPR001623 -
Mibi08g2241 468 PRINTS DnaJ domain signature 84 102 IPR001623 -
Mibi08g2241 468 PRINTS DnaJ domain signature 119 139 IPR001623 -
Mibi08g2241 468 PRINTS DnaJ domain signature 102 117 IPR001623 -
Mibi08g2241 468 ProSiteProfiles Zinc finger CR-type profile. 209 283 IPR001305 GO:0031072|GO:0051082
Mibi08g2241 468 Gene3D - 218 251 - -
Mibi08g2241 468 Gene3D - 252 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2241 Mibi-ChrMibi08 40147385 40154404 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2241 78 148 C2H2 Transcription Factor Family AT1G74250 36.842 3.20e-07 50.8