Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2239 ATGGTTTGCGCTGATTCTGGGCAATCTGACAGTAGGTGTGAGTTTACTAGAAGGCACTGGACGAGCCGATCTGCGAGCTTATTTTGCGGTAAAATAGGAGAGCTTCCTGTCATCCAAGAACAGATGTTTACGAGGAAGAAAAGGAAAGGCAGTGAGACTGGTGCATCCTCAAATCTTCCTGAAATTTTGACTTCACATCATGGGAACCATGGATCGCTGTCATCAAATGTTAAGTCTCATTACTCGCTTGAAGATTGTTCCCGGTTGAAGAAGAGGTGTAAAGAACATGCTGATGCAGATACGGTTGCTTCCTGTAATAAAAGGCTTGCAGGCTTTGCCACCGCTCCGCCTTGTGGGACATCATCTTTGATCACGCCCGGAAGAGGTCTCAAGAGGAAGATAGGGTGTATTGATGTTGCTACCCAAATGGGCAGGAAGAAAAAGATAGAGGACGATTATATTTCTGGTGAAACAATTGGACAAGGCAAATTTGGATCTGTATGTTTGTGTCGGTCCAGGCTTAGTGGGGCAGAATTTGCATGTAAGACTCTGAGCAAGGGGGAGGAGACAGTTCATCGAGAAGTGGAAATAATGCAACACTTATCTGGACATCCAGGGGTTGTGACGCTGCAGGCAGTGTATGAAGAAGCTGATTGCTTCCATCTTGTAATGGAGTTGTGCCCTGGAGGGCGATTGATTGATAGGATGAGTAAGGAGGGCTATTATACGGAACAAATGGCTGCTAATGTAATCAAGGAAGTGATGTTAGTCATTAAGTATTGCCATGATATGGGAGTGGTGCACAGAGATATTAAACCTGAAAATATCCTTCTAACAGCATCTGGAAAAATAAAGCTTGCAGATTTTGGGCTGGCCATGAGAATATCTAATGGCCAGAATTTGACTGGTTTGGCTGGAAGCCCTGCATATGTTGCTCCGGAGGTATTGCTAGGCAGCTATTCTGAGAAGGTGGATGTATGGAGTGCTGGAGTTCTCCTGCATACTCTGTTAGTTGGCTTTCTTCCATTTAATGGAGATTCGTTGGAAGCAGTATTTGAGGCTGTTAAGAATGTCACACTGGATTACCAAAAGGGTATGTGGGATTTGATATCTAAGCCTGCCCGAGATCTTGTTGGGAGGATGCTGACAAGGGATGTTCAAACAAGGATAACAGCTGATGAAGTACTTCGGCATCCATGGATACTATTCTACACAGAACCTACTTTAGAAAAACTGCCCATGAGAACAAAGTTGAAGAATCAAATAGGAGCCACTTGCCGCCAGTTCATTGTGCCTGGACTTAGGTCAGGAGGAAACAAGATAGACGATGGCTCCCATGGTGAGATTACAAGCTCGCTTTCATCCTCAGAGAGCAGCGATTCAGAGGAGGAGGACGGTGGTGTGTTGATTGATGTGCTGGCATCTGCAATTTCACATGTGAGGATATCCGAACCCAAGAGAAGCAGGTTGTGTGGACCAACAGGTCCAATGGATCAGCAAGGATCATCTAACATGAAGGCTAACAACCTCTGTAAAGCATTTTGA 1545 0.4505 MVCADSGQSDSRCEFTRRHWTSRSASLFCGKIGELPVIQEQMFTRKKRKGSETGASSNLPEILTSHHGNHGSLSSNVKSHYSLEDCSRLKKRCKEHADADTVASCNKRLAGFATAPPCGTSSLITPGRGLKRKIGCIDVATQMGRKKKIEDDYISGETIGQGKFGSVCLCRSRLSGAEFACKTLSKGEETVHREVEIMQHLSGHPGVVTLQAVYEEADCFHLVMELCPGGRLIDRMSKEGYYTEQMAANVIKEVMLVIKYCHDMGVVHRDIKPENILLTASGKIKLADFGLAMRISNGQNLTGLAGSPAYVAPEVLLGSYSEKVDVWSAGVLLHTLLVGFLPFNGDSLEAVFEAVKNVTLDYQKGMWDLISKPARDLVGRMLTRDVQTRITADEVLRHPWILFYTEPTLEKLPMRTKLKNQIGATCRQFIVPGLRSGGNKIDDGSHGEITSSLSSSESSDSEEEDGGVLIDVLASAISHVRISEPKRSRLCGPTGPMDQQGSSNMKANNLCKAF 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2239 514 MobiDBLite consensus disorder prediction 486 514 - -
Mibi08g2239 514 PANTHER SERINE/THREONINE-PROTEIN KINASE 139 421 - -
Mibi08g2239 514 ProSitePatterns Protein kinases ATP-binding region signature. 159 182 IPR017441 GO:0005524
Mibi08g2239 514 MobiDBLite consensus disorder prediction 495 514 - -
Mibi08g2239 514 SUPERFAMILY Protein kinase-like (PK-like) 150 419 IPR011009 -
Mibi08g2239 514 SMART serkin_6 153 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2239 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Mibi08g2239 514 ProSiteProfiles Protein kinase domain profile. 153 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2239 514 Pfam Protein kinase domain 154 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2239 514 MobiDBLite consensus disorder prediction 437 465 - -
Mibi08g2239 514 MobiDBLite consensus disorder prediction 43 76 - -
Mibi08g2239 514 CDD STKc_CAMK 152 400 - -
Mibi08g2239 514 FunFam Serine/threonine-protein kinase PEPKR2 144 468 - -
Mibi08g2239 514 MobiDBLite consensus disorder prediction 53 76 - -
Mibi08g2239 514 Gene3D Transferase(Phosphotransferase) domain 1 144 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2239 Mibi-ChrMibi08 40116148 40118913 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2239 137 457 EF-hand Containing Proteins AT2G38910 40.060 3.61e-76 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mibi08g2239 Pkinase 3.4e-68 CL0016