Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2227 ATGGGCTTCCTCTCCTGCAATGCCGAATCTGCAATCGCCACCTGTGATTCCCACTACTGGGACCTCAAGAAGAGAAATCCCAACAGCAAGCTCCTTCAGATCAGGGAGTTCCACTTCTCCGAGCTCCTCGCCGCCACCGGCAACTTCTCCGCCGACACCTTCCTCGGAAAAGGCAGCCATGGCAGCGTCTACAGAGCCACCCTCGACGACGGCAAGCTCATCGCCGCCGTCAAGAGGACCAAATCCTCCCCCGACAACAACGAGATCGAGATCCTCTCTAGCGTCCGAAACCCCCGCCGATTCGTCAACCTCATCGGATTCTCCGCCGACACTAACGGAAATCAGTTAATGGTCGTCCAGTACATGCTCAACGGCTCCCTCTACGACGCCCTCCACTCAGCCCCCAGACCGCCCGGTTGGAACCGGAGGCTCCGGTTCGCTCTCCAGGTAGCGAAGGCCGTACAGGCTCTTCACTCGGCCAACCCGCCGGTGATTCACAGGGACATAAAGTCGTCGAACGTCCTCATCGACGAGAAGAAGAAGGCGAGGCTGGGGGATTTCGGTCTGGCGCTGAGGGGACACGTGGAGGACGTTCGTGTGAAATGCACGCCGCCGGCGGGCACCATGGGGTATCTGGACCCCTCCTATTTGGCCCCTTCGGATCTGAGCGCCAAGAGCGACGTGTTCAGCTTCGGGATCTTGCTTTTGGAGATTATCAGCGGGAGGAAGGCGATCGATTTGAATTATAGTCCGCCGTCGGTGGTGGATTGGGCGGTGCCGATGATAAGGCGAGGGGAGTTCGTGGGGATCTGTGACAGGCGGATCGGGAGGCCGTCGGAGATGGGGGTTGTGAAGGAGGTGGGGAAGTTGGCGGCAAGGTGTGTGAGGTCGACGGCGGAGAAGAGGCCGTCGATGGGGGAGGCGGTGGAGAGGCTGGAGCGGGTGAGGAAGAGGATGATATGGAGGGGATTGAGGGGGAGGGAGGTGGAGAAGAATGAGGAATTGGGGGAGAGGATGACTGAGCAAGTGGCTGGAAGAATAATGGTGAGAGGAGGAAGCAGGAGGAATGGGAAAGTCTCCAGTGTGAGTGTGGAGAATTCGAAGGAGATTGCTGAAGGTTGTGGTGACGCAGTTGGGAGGTCGACATCAATGCCCCAGGCGAATGTGGGGAGGACGAACAAGGTCTATTTCCATGGAGGGTTTTGCAAACTTCAGTGA 1218 0.5846 MGFLSCNAESAIATCDSHYWDLKKRNPNSKLLQIREFHFSELLAATGNFSADTFLGKGSHGSVYRATLDDGKLIAAVKRTKSSPDNNEIEILSSVRNPRRFVNLIGFSADTNGNQLMVVQYMLNGSLYDALHSAPRPPGWNRRLRFALQVAKAVQALHSANPPVIHRDIKSSNVLIDEKKKARLGDFGLALRGHVEDVRVKCTPPAGTMGYLDPSYLAPSDLSAKSDVFSFGILLLEIISGRKAIDLNYSPPSVVDWAVPMIRRGEFVGICDRRIGRPSEMGVVKEVGKLAARCVRSTAEKRPSMGEAVERLERVRKRMIWRGLRGREVEKNEELGERMTEQVAGRIMVRGGSRRNGKVSSVSVENSKEIAEGCGDAVGRSTSMPQANVGRTNKVYFHGGFCKLQ 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2227 405 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 30 319 IPR044815 GO:0004674
Mibi08g2227 405 Gene3D Transferase(Phosphotransferase) domain 1 122 326 - -
Mibi08g2227 405 SMART serkin_6 49 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2227 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Mibi08g2227 405 Gene3D Phosphorylase Kinase; domain 1 21 121 - -
Mibi08g2227 405 Pfam Protein tyrosine and serine/threonine kinase 53 312 IPR001245 GO:0004672|GO:0006468
Mibi08g2227 405 FunFam Serine/threonine-protein kinase-like protein 122 324 - -
Mibi08g2227 405 ProSiteProfiles Protein kinase domain profile. 49 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2227 405 SUPERFAMILY Protein kinase-like (PK-like) 29 317 IPR011009 -
Mibi08g2227 405 ProSitePatterns Protein kinases ATP-binding region signature. 55 78 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2227 Mibi-ChrMibi08 40042326 40043543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2227 35 320 Receptor kinase-like Gene Family AT3G59420 41.137 3.65e-66 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Mibi08g2227 PK_Tyr_Ser-Thr 1.1e-35 CL0016