Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2221 ATGGCACCCAGTTTCGATTGCGTATCGAGTCTTCTTTGTACGGAAGACACCATCGTATTCGATGATAACGATTATGAGAGTACGATGGGGGTGCCCGATAATTCGGGGCATCAAACTCACCATCGACTTCCCAATCTGAACTTTTTCTTTGATGGTGAAACTGGGTTGCCTTTGCAGAGTGATGAGTGTTTGGCGATAATGCTGGAAAAAGAGTGCCATCATATGCCTGCTGGCGATTATCTGAATAAGCTTCGGACTGGTGTTTTGGACTCTGGGGCTAGGAAGGAGGCCATTGATTGGATTGAAAAGGTTCGTTCACATTTCCATTTTGGACCTCTCTGTGCATATTTATCCATGAACTACATGGATCGGTTCCTGTCTCTCTATGAATTACCAAAGGGAAAATCTTGGTCAATGCAATTGCTGGCTGTGGCATGCTTATCTCTTGCAGCCAAGCTAGAGGAGAGTGAAGTTCCCCTGTGTGTTGATTTGCAGGTGGCTGAATCAAAATTTATATTTGAAGCCAGAACGATTCAGAGAATGGAGCTTCTCATACTTGGCACACTTAAGTGGAGAATGCAAGCAATTAGCCCTTTCTCCTTTGTAGACCATTTCATAAGCAAGATCAATGAAGATCAAACTCCACTAAGAACTTCTACATCAAAATATATCCAACTTATATTGAATACTGTGAGAGAGATTGACTCATTGGAATTCAAGCCATCAGAAATAGCAGCAGCTGTGGCTATATTTGTTGTGGGGGAATCCCAAACAGTTAACGCAGAGAAAGCTATCTCTGTTCTTGCTCAACACGTAGATAAGGAGAGAGTCTTGAAGTGTTTTAAAGTGATCCAAGAGTTGTCATCAAACAGCAGCACCGGCGGCTCTTCTGGTGCTTGTGCTCCTCGAAGCCCTATTGGGGTATTGGATGCAGCATGCTTGAGCTATAAAAGTGATGACATAGATGTTTCATGCTCAAGTTCTTCTTCGCATAATAATGCTGCAGAAGCTAAAAGGAGGAAGCTAAACAAAACCAGTGCAACTGATCTATAA 1053 0.4283 MAPSFDCVSSLLCTEDTIVFDDNDYESTMGVPDNSGHQTHHRLPNLNFFFDGETGLPLQSDECLAIMLEKECHHMPAGDYLNKLRTGVLDSGARKEAIDWIEKVRSHFHFGPLCAYLSMNYMDRFLSLYELPKGKSWSMQLLAVACLSLAAKLEESEVPLCVDLQVAESKFIFEARTIQRMELLILGTLKWRMQAISPFSFVDHFISKINEDQTPLRTSTSKYIQLILNTVREIDSLEFKPSEIAAAVAIFVVGESQTVNAEKAISVLAQHVDKERVLKCFKVIQELSSNSSTGGSSGACAPRSPIGVLDAACLSYKSDDIDVSCSSSSSHNNAAEAKRRKLNKTSATDL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2221 350 SUPERFAMILY Cyclin-like 57 193 IPR036915 -
Mibi08g2221 350 MobiDBLite consensus disorder prediction 326 350 - -
Mibi08g2221 350 Pfam Cyclin, N-terminal domain 64 193 IPR006671 -
Mibi08g2221 350 PANTHER CYCLINS 61 290 IPR039361 -
Mibi08g2221 350 SMART cyclin_7 99 187 IPR013763 -
Mibi08g2221 350 MobiDBLite consensus disorder prediction 334 350 - -
Mibi08g2221 350 FunFam D2/4-type cyclin 77 191 - -
Mibi08g2221 350 ProSitePatterns Cyclins signature. 94 125 IPR006671 -
Mibi08g2221 350 Gene3D - 65 282 - -
Mibi08g2221 350 SUPERFAMILY Cyclin-like 178 253 IPR036915 -
Mibi08g2221 350 FunFam D6-type cyclin 192 282 - -
Mibi08g2221 350 SMART Cyclin_C_2 196 329 IPR004367 -
Mibi08g2221 350 CDD CYCLIN 94 186 IPR013763 -
Mibi08g2221 350 Gene3D - 77 194 - -
Mibi08g2221 350 Pfam Cyclin, C-terminal domain 197 293 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2221 Mibi-ChrMibi08 39965696 39967576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2221 40 326 Core Cell Cycle Gene Families AT2G22490 43.689 3.54e-79 244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2221 08 39965696 39967576 Mibi08g2221 08 39965696 39967576 ECH