Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2211 ATGAAAGGTGAATATGTAGTAGAGCAACAAGAAACAAAATCATCAGATCCTACCCCCATCATGTTCTCCAAACTCCACCACCACCAACACAACAACCCCTTCTCCCACCACCACCCTTTCCACCTCTCTCGCGATTCCCAAACCTCCGAAGAAGATGACGTCACCACCACCACCCCCAACCACAACCCCACCAAGCCCTCCCCCTCCTCCGCCGCCGCCGCCGACGGCTCCAGCATTGAAGTGGTCCGCCGTCCACGTGGCCGCCCTCCAGGCTCCAAGAACAAGCCCAAGCCACCTGTCATCATAACACGTGACCCAGAACCCACCATGAGCTCCTTCATCCTCGAAGTCCCCGGCGGTACCGACGTGGTCGACGCCATCACCCGCTTCTGCCGCCGCAAAAACACCGGCCTCTGTATCTTAACGGCGTCCGGCACAGTCGCTAACGTCACCCTCCGTCAACCCTCTACAACCCCCGGGGCCACCGTTACTTTTCACGGCCGTTTTGATATCTTATCCATATCCGCCACCTTTCTGCTTAACCAGAATTCTGGTGCCGTGCCGCCGGTTCCTAACAGCTTTACGATATCGTTGGCGGGCCCACAGGGTCAGATCGTCGGGGGTTTGGTCGCCGGGAGTTTGTTGGCGGCGGGGACGGTGTTTGTGGTGGCGGCTTCGTTTAATAATCCGTCGTACCATAGGCTGCCGGCGGCGGAGGAGGACGTTAGGAACTCTGCTTCTGGCGGCGGCGGAGAGGGGCAGTCGCCGCCGGTGTCGGGAGGAGGCGGGGAGAGTGGCCACGTGGCGGCGGGTGATTCGTGTGGGATGTCGATGTCGTCCATGTACAGCTGTCAACTGCCGTCGTCGGATGTGATTTGGGCTCCCACGGCAAGGCCACCACCGCCACCATATTGA 915 0.5989 MKGEYVVEQQETKSSDPTPIMFSKLHHHQHNNPFSHHHPFHLSRDSQTSEEDDVTTTTPNHNPTKPSPSSAAAADGSSIEVVRRPRGRPPGSKNKPKPPVIITRDPEPTMSSFILEVPGGTDVVDAITRFCRRKNTGLCILTASGTVANVTLRQPSTTPGATVTFHGRFDILSISATFLLNQNSGAVPPVPNSFTISLAGPQGQIVGGLVAGSLLAAGTVFVVAASFNNPSYHRLPAAEEDVRNSASGGGGEGQSPPVSGGGGESGHVAAGDSCGMSMSSMYSCQLPSSDVIWAPTARPPPPPY 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2211 304 PIRSF ESCAROLA 9 301 IPR014476 GO:0003680
Mibi08g2211 304 Pfam Plants and Prokaryotes Conserved (PCC) domain 113 229 IPR005175 -
Mibi08g2211 304 FunFam AT-hook motif nuclear-localized protein 111 247 - -
Mibi08g2211 304 CDD DUF296 113 227 IPR005175 -
Mibi08g2211 304 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 48 294 IPR014476 GO:0003680
Mibi08g2211 304 Gene3D - 110 246 - -
Mibi08g2211 304 ProSiteProfiles PPC domain profile profile. 107 248 IPR005175 -
Mibi08g2211 304 MobiDBLite consensus disorder prediction 1 107 - -
Mibi08g2211 304 MobiDBLite consensus disorder prediction 240 271 - -
Mibi08g2211 304 MobiDBLite consensus disorder prediction 52 74 - -
Mibi08g2211 304 SUPERFAMILY AF0104/ALDC/Ptd012-like 109 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2211 Mibi-ChrMibi08 39835263 39836177 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2211 1 302 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 58.147 7.70e-107 310
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2211 08 39835263 39836177 Mibi08g2211 08 39835263 39836177 ECH