Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2204 ATGCCGGAGGCGTTAACTTTATCATCTCCTAGGCGCCACATAAATCCACCACTTCCTTGCCCCGTAAATTTCTTCGATTTCCAGGAACTGGGGAATTCCAGTTCAATGCAGCTGTCTCACGACGTTAGGGCCTACAATAATAGTCGATGCTGCAGTTTTCATCATAAACCAATGGGCGTTGGCCGATTACATTTGGTTACCATCAATATTTTGCCGCATGGTTTGAGGCGTGATTCTTCAGCCCTCCATCTTTTAAGTAAAGTGCATGCCCCGTTAAGGCCTCTTCCTAGCAGATGTAATGTTTTACTGTGCCGTGCCATATTACCAGCCGGAGGGAGTTGGACCCCACTAACAAAATCTGCTTCTGTGTTCTTAAAAAGGTCATATGACGCATTGCAAGGAAGCCCAGTCACTACTCAGTTGATCCCAGCCCTTGGTGTCATTGCCTTTGCTGTTTGTGGTCTTGAACCTCTTATGCGGCTGTGCAGGGTTATATTTCTCCAAAGGAATGATAATAGTTGGAAGAAAAGTAGTTCGCGTGATATTATGACATCTTATTTGCAGCCTTTGCTACTGTGGACTGGGGTTATGCTTGTCTGCAGGGCATTAGATCCACTAACCCTACCATCAGAAGCCAGCCAGGCAGTGAAGCAACGACTGCTGACTTTTATGAGATCTTTGTCAACCGTGCTCTCATTTGCTTATTGTTTTTCAAGCTTTATTCAACAAGCACAAAAATTTTTTATGGAGGCAAACGAATCCAATGACGCAAGAAATATGGGCTTTGATTTTGCTGGGAAAGCCGTGTATACTGCTGTATGGGTCGCTGCTGTATCATTATTTATGGAGCTGCTAGGTTTCTCCACACAGAAGTGGGTAACTGCCGGTGGTTTGGGTACAGTATTGCTCACACTAGCTGGCCGTGAGATATTTACAAACTTCCTTTCAAGTGTAATGATTCATGCAACCCGGCCATTTGTTGTAAATGAGTGGATTAAAACGAAGATTGATGGATATGAGGTTTCTGGTATAGTAGAGCATGTAGGTTGGTGGTCACCAACAATAGTGAGAGGTGACGATCGTGAAGCAGTTCACATTCCTAATCACAAGTTCACTGTCAATGTTGTGCGGAATCTTACTCAGAGAACTCATTGGCGTATCAAGACTCACCTCGCTATTAGTCACTTGGATGTTAACAAGATTAATAATATTGTTGCTGATATGCGCAAAGTTTTGGCCAAAAATCCTCTGGTGGAGCAACAAAAGTTGCACAGACGGGTTTTTCTCGAGCATGTCAATACTGAAAATCAGTCCCTTATGATATTAATATCTTGCTTTGTTAAAACTTCACATTTTGAAGAATACCTCTGTGTCCAGGAGGCCATCCTTATGGATCTTCTGAGAGTTATCAGTCATCATCGAGCTCGGCTGGCCACACCCATCCGCACAGTCCAGAAAGTATACAGCGAGGCTGACCTGGAGAACATACCATTTGGTGACCCTATATTTACTCGCTCCAGAGCAGCAGCAAATCGCCCATTTCTACTGATAGAGCCACCTTCCAAAGTTAATGGCGAAGACAGAGCGAAGGCTCCTTCTCGTTCAACGCGTCCAAGTGAAGACAAAGATGTCAAAATAGTTGAAACACTGCCATCTGATTCCAAAGATGACAATCTTGCAGCGGCATCGACATCAACAGCAACGTCAACGTTAGGTGCAAACTCCAGGGATAAATCAAAGTCAGTCTCTGAAGCACAGGCTCAGGATGTGGGTTCTGATAATACTGTCCAGAAGACATCCAAAACCACGCAGCCCAAAAAGGAAAGTTCAGGAGATGCTGGGAAAGGACCTGTTGCCCCAGACCTCGCTCAAAGTGTTGCCCCTGAAAATTCTTCTTCCTCTTCTCATGAGTTTACTGGAAGGGGAGATACTACTCCTGCTACATCTTTACAGGCAAAGCAAGAGGAAGACAAATATGCTGTATCCTCCTCACCTGCCAGGCCTTCCTTAGAAGAAAATATTGTTCTTGGTGTTGCCCTTGAAGGCTCAAAACGAACTCTTCCAATTGCCGAAGAAATGGCTCCACCTCCCACCCCAACAGAGGCACAAGAATTTGCCGCCCAAAGAAATGGAAACGGATCTGCTGGCAAGGATAAAAAGGATGGTCAAATTTCTACCAAGCAGCAGAGCGAGTAG 2196 0.4485 MPEALTLSSPRRHINPPLPCPVNFFDFQELGNSSSMQLSHDVRAYNNSRCCSFHHKPMGVGRLHLVTINILPHGLRRDSSALHLLSKVHAPLRPLPSRCNVLLCRAILPAGGSWTPLTKSASVFLKRSYDALQGSPVTTQLIPALGVIAFAVCGLEPLMRLCRVIFLQRNDNSWKKSSSRDIMTSYLQPLLLWTGVMLVCRALDPLTLPSEASQAVKQRLLTFMRSLSTVLSFAYCFSSFIQQAQKFFMEANESNDARNMGFDFAGKAVYTAVWVAAVSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIKTKIDGYEVSGIVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNLTQRTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPLVEQQKLHRRVFLEHVNTENQSLMILISCFVKTSHFEEYLCVQEAILMDLLRVISHHRARLATPIRTVQKVYSEADLENIPFGDPIFTRSRAAANRPFLLIEPPSKVNGEDRAKAPSRSTRPSEDKDVKIVETLPSDSKDDNLAAASTSTATSTLGANSRDKSKSVSEAQAQDVGSDNTVQKTSKTTQPKKESSGDAGKGPVAPDLAQSVAPENSSSSSHEFTGRGDTTPATSLQAKQEEDKYAVSSSPARPSLEENIVLGVALEGSKRTLPIAEEMAPPPTPTEAQEFAAQRNGNGSAGKDKKDGQISTKQQSE 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2204 731 Gene3D - 221 324 - -
Mibi08g2204 731 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 34 727 IPR045042 -
Mibi08g2204 731 SUPERFAMILY Sm-like ribonucleoproteins 310 380 IPR010920 -
Mibi08g2204 731 Pfam Mechanosensitive ion channel 267 473 IPR006685 GO:0016020|GO:0055085
Mibi08g2204 731 Gene3D - 325 378 IPR023408 -
Mibi08g2204 731 MobiDBLite consensus disorder prediction 556 609 - -
Mibi08g2204 731 MobiDBLite consensus disorder prediction 625 658 - -
Mibi08g2204 731 MobiDBLite consensus disorder prediction 523 552 - -
Mibi08g2204 731 MobiDBLite consensus disorder prediction 518 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2204 Mibi-ChrMibi08 39706098 39712416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2204 35 706 Mechanosensitive Ion Channel Family AT1G58200 53.736 0.0 720