Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2196 ATGAGCGAAGAAGAGGAGAGTTTTATAGAAACGAAGTCGGCGCATCCAGGTCTTCTTTTTGACTCTACAAAATGTGGCGCACTGAATCTGCAAGACAAACAAAAGCTAGTTCAAGAGATTGCTCAACAATCAAAAGATGCCAGAAATATGCTCTACTCATTTACCCGCAAGGAGCTTCTAGAAATAATATGTGCTGAACTTGGCAAAGAGAGGAAGTACACTGGATATACTAAAACTCAAATGATAGAGTATCTTCTTAAAATAATTTCTAGGAAATCCAAGTTGCACACAGTCCAAAATAACAGTCATATTGGTTCTAAAAGGAAAAGTGGACCTCCGTATCAAGATTTACATCATGTTCCTCTGGCATATCATAAAGAGGAAAAAGTAAAATCCTTACTGTGTCAGAATGTTGCATGCCGAGCTACTTTGTGTCCTGAAGATGCTTTTTGTAAGAGATGTTCTTGCTGTATTTGTCATTTTTATGATGATAACAAGGATCCTAGTATATGGTTGACCTGTGGATCTGATCTTCTTGATGAGAAGGATTCATGTGGAATGTCTTGTCATTTACAATGTGCTTTGAATTATAAGAGGTCTGGCATTTTGAAGGGCATATTTAGTACAACATTAGATGGAAGTTTTTCTTGTGTTTCTTGTGGAAAAATTAATGGATTAATGAGGACCTGGAGAAAGCAATTATTGGTCGCAAAAGAAGCCAGAAGAGTTGATATACTGTGTTTACGGTTATCCTTGGCTCACAGAATTCTATTAGGAACTGTGGTATACAAGGAAGTACATATGATTGTAGAAGCTGCTCTCAAATTGCTTAACAATGAAGTGGGGCCTCAGGATCAGGAAAGCTTAAGGATGACACGAGGCATTGTGAACAGGCTCTCATGCGGTGCTGAGGTTCAGAAGTTGTGCTCTTATGCAGTTGAGCGTTTTGATTCAACGTTTCCTAGCCTTTACCCTTACTCTGCGGAAAAGAAAAATGTACCAACGTGCACTATACGTTTTGAAGAATGCCTTCCCACCTCTGTGGTCATTGTGCTAGGGTATGAAGATCATCTTTTAAAAGACTTTTTGGGCTGCAGGCTCTGGCACAGAACATCAACAATGGACTACACTGAACAACCCACCTTCATTGTATTAAGGCCAGAAAAAAAGTTTAAGTTGGAAAATCTCTATCCTTCAACTGAGTATTTTTGCAAGGTTTCTCTTTTTAGCAGCACTGGCATTCTGGGCACTGCAGAAGCTAGATGGGTCACCCCTTGTAATCCAAACGTATCTCCTTCAAAATTTGCTAGAACTGGCAGTGATAAGGATCATGTTAGATATTCGCCTCTTGGATCCTCTGTCACCACTTTGGACATACATGCACGGGAAAAACACAGGATAACTGTTGAAAACCTTCATCACATGGAATCTGTCAACTCTGACGTCAACTCATTCTCTAGGGACCACCTTGCAAAACTTTCCTTGTCTGATAACTTCAGGGGCAGGATTGAAGGGTTCCTCTCAAAGCCTCCATCAATTGAATCTCTTACATCTAAAACTTTTGCAGCGGTTTCACCTCCCACACCGTCAAAATTGGATGAAATGAGACAAGTTACAGGTTTGGGTGGTAGAAAGCGCTTGGAGGAAAATGATTATGAGTACTCAGTCAGGGTAGTCAAATGGTTAGAGCATGAAGGTCACATTGACCAAAACTTCAGAGTTAAATTTCTGACTTGGTTCAGTCTTAAAGCTAATCCACAAGAGAGAAGGGTGGTTAGTGCATTTGTGGATGCATTGATTGATGACCCACCGAGCTTAGTTGATCAGCTTATACACACCTTCATGGACGAAATATGTTGCGAGCAAAAACTTTAG 1875 0.4021 MSEEEESFIETKSAHPGLLFDSTKCGALNLQDKQKLVQEIAQQSKDARNMLYSFTRKELLEIICAELGKERKYTGYTKTQMIEYLLKIISRKSKLHTVQNNSHIGSKRKSGPPYQDLHHVPLAYHKEEKVKSLLCQNVACRATLCPEDAFCKRCSCCICHFYDDNKDPSIWLTCGSDLLDEKDSCGMSCHLQCALNYKRSGILKGIFSTTLDGSFSCVSCGKINGLMRTWRKQLLVAKEARRVDILCLRLSLAHRILLGTVVYKEVHMIVEAALKLLNNEVGPQDQESLRMTRGIVNRLSCGAEVQKLCSYAVERFDSTFPSLYPYSAEKKNVPTCTIRFEECLPTSVVIVLGYEDHLLKDFLGCRLWHRTSTMDYTEQPTFIVLRPEKKFKLENLYPSTEYFCKVSLFSSTGILGTAEARWVTPCNPNVSPSKFARTGSDKDHVRYSPLGSSVTTLDIHAREKHRITVENLHHMESVNSDVNSFSRDHLAKLSLSDNFRGRIEGFLSKPPSIESLTSKTFAAVSPPTPSKLDEMRQVTGLGGRKRLEENDYEYSVRVVKWLEHEGHIDQNFRVKFLTWFSLKANPQERRVVSAFVDALIDDPPSLVDQLIHTFMDEICCEQKL 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2196 624 CDD PHD_VIN3_plant 155 220 - -
Mibi08g2196 624 PANTHER VIN3-LIKE PROTEIN 2-RELATED 19 456 IPR044514 GO:0010048|GO:0040029
Mibi08g2196 624 Pfam PHD - plant homeodomain finger protein 135 255 IPR032881 -
Mibi08g2196 624 Coils Coil 30 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2196 Mibi-ChrMibi08 39597190 39601686 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2196 9 618 PHD Gene Family AT5G57380 33.230 7.61e-104 325