Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2192 ATGCCTCATAGAGCGACTTACTTTTTCCCAAGGCAATTCCCAGCAGAGCGAGGGTTGAATGATGAATCTTCGAACCAGCTATTAGATCACGAGAAGAAGAAGAAGATTGCCAACGCCATCAAATCAGAAACCTATGACGCTGAAAGAGACCCTAAAAAGGCCAATAATAATAATAATAATAATAATACAACTACCACAAGTAACGACGTCGTTTTCCCGTCAGGGAAGCACTCAGCAGTTTCAGACCTTTTCACGGGCAATGACAAGTTCCGTACGAAGCAGAAGCAAGTGGCTGCTTTACGCAATTGGTTGATAGAGAAAAAAGGGGACAGATCTGGTCACGTGAAACCACACACTAGCCGGTTTTCCTGTGAGGGAGAACGCGAGCTTCTGCTTCCGCCGGAGGAGGATTCAGAGCCGCCGGAGACGGCGAAGGATGGAATTGACCGGAGTTTTGACCGGCAAGTCTCGTTACCGAGATTATCCAGTGGGAGTAGCTATGCTGGGAGCTTGTTCTCTGGGACAACACTGGATGGGAATTTCTCTAGCGAAATTATTAAGGAGGAAACAACGTCGCCTCGGGTGTCCCCAACAACAAGGAGATTAGAGGTAGAGGAGGAGGAGGAGGAGGAAGAAAATAAGAAGACGTTGGCTCAGAAGTGTAAAGAAAGCTTCTGCCTGCAAATCTCGCTGGCTAAGAGAGTTACTTGTTTAGCAAGTCTCGCTGCCGATGAACCTGTGCTTACTTTGGACGCCGGAATCGAAACGTGGGATGTCGAATCCGTTTCTTATCGTCTCTGGGTTAGTGGCTGCTTATCATATACTGACAAAATATCGGATGGTTTTTATAATATCTTGGGGATGAATCCATATCTGTGGGTGATGTGCAATGAGCTGGAGGAAGGTAGTAAGCTCCCGCCTTTGATGACGCTTAAAGCAGTCGAGCCAAGCGAGACGTCTATGGAGGTGGTTCTTGTAGATAGACATGAGGACTCTAGGCTAAAGGCGCTTCATGATAAAGCACGAGAATTGTATAGTCATTCAGAGAATACCTTGGTATTGGTGGAAAAACTTGGAAAACTTGTTGCGATTTATATGGGGGGCACCTTCCCGGTGGAGCAAGGAGATCTTCACAAGCAATGGAAGTTGGTTAGTAAGAGATTGAAGAATTTTCAAAAGTGTGTTGTGCTTCCTATCGGTAGCCTATCCGCAGGACTCTGCAGGCATCGGGCAATCCTCTTCAAGAGATTGGCAGATTACATTGGTTTGCCTTGTCGTATTGCTCGAGGTTGCAAATATTGTGCTGCAGATCATAGATCTTCTTGCCTGGTCAAGATTAAAGATGACAGACAACTCTCAAGGGAATATGTAGTAGATCTAGTTGGGGAACCTGGAAATGTCCATGGGCCAGATTCCTCAATTAATGGAGCATATGTCTGTTCAACGCCTTCCCCTATTCAAATTTCTCATATACGGGAATCTCGGTCTCCTTATATGAATTATGCATCAAGTTCTCGGTTTTCAAGTTCCACAGACAGTGAAAGTCATTTATATTCTGGCCGTACTAAGAAAGATCAACTGGTCAAAGGATATGATTTACTTAAATTTCCTGTGAACTCAAAATATGCTTCAGTTGATCAAACTCATCCAGTTACTGCTGAGGAACGTGGAGCTCTATATTCAAATTTGCCTTCCATTCAGGAAGGTGTTCCTGAAGACCTGCATTCAGCCCCTGAGGCATTGTTGCATGTTGAAGATTCAGTTGTCACAAAAGAAATTTCCAATAACGAGATCATTGTAACCGAAAGTCCAGTGGCAAAAGCTACTTCTAAAAAACCTATACTGGGCCCATCCTGCCAGTCAGAAATAGAATATAAAGATAGTAGACTTGAAAAGCGTGACCATTTTTCTGCTGGAAACATTCCAAGATATGTGAATCTTGAGCCGTCACTGGCCATGGACTGGCTTGAAATATCATGGGATGAATTACGCATTAAAGAACGTGTTGGTGCTGGGTCATTTGGGACAGTGCACCGTGCTGAATGGCATGGATCTGATGTTGCAGTTAAGGTTTTAACAATTCAGGATTTCCAGGATGATCAGTTGAAGGAGTTCCTGAGAGAGGTTGCAATAATGAAACGTGTCCGCCATCCAAATGTGGTGCTTTTCATGGGAGCAGTTACCAAACGGCCTCACCTATCGATTGTAACAGAATATTTGCCAAGGGGTAGTTTATACCGGCTGATACATAGGCCAGCATCAGGTGAAATATTGGATCAGAGGAGACGATTACGGATGGCTTTAGATGTGGCTAAAGGGATCAATTATCTACACTGTTTGAGCCCTCCAATTGTGCATTGGGATCTCAAATCCCCAAATTTGTTAGTTGACAGGAATTGGACTGTGAAGGTGTGTGATTTTGGATTGTCAAGATTCAAGGCGAACACTTTCATATCATCAAAATCTGTTGCTGGAACACCCGAGTGGATGGCTCCAGAATTTCTTCGTGGTGAACCTTCAAATGAGAAGTCTGATGTTTACAGTTTTGGAGTTATCCTGTGGGAACTTGTGACCATGCAGCAACCATGGAATGGACTCAGTCATGCCCAGGTGGTTGGAGCTGTTGCTTTTCAGAACCGGAAGCTTGCTATTCCTCCAAACATCTCCCCAGTATTGGCCTCCCTCATGGAGTCATGTTGGGATGATGATCCCAAAAAAAGGCCTTCTTTCTCCAGTATTGTAGAATCGCTAAAGAAGCTGCTGAGATCTCCTGTGGAGATGATAAAAATGGGTGGGACATAA 2802 0.4443 MPHRATYFFPRQFPAERGLNDESSNQLLDHEKKKKIANAIKSETYDAERDPKKANNNNNNNNTTTTSNDVVFPSGKHSAVSDLFTGNDKFRTKQKQVAALRNWLIEKKGDRSGHVKPHTSRFSCEGERELLLPPEEDSEPPETAKDGIDRSFDRQVSLPRLSSGSSYAGSLFSGTTLDGNFSSEIIKEETTSPRVSPTTRRLEVEEEEEEEENKKTLAQKCKESFCLQISLAKRVTCLASLAADEPVLTLDAGIETWDVESVSYRLWVSGCLSYTDKISDGFYNILGMNPYLWVMCNELEEGSKLPPLMTLKAVEPSETSMEVVLVDRHEDSRLKALHDKARELYSHSENTLVLVEKLGKLVAIYMGGTFPVEQGDLHKQWKLVSKRLKNFQKCVVLPIGSLSAGLCRHRAILFKRLADYIGLPCRIARGCKYCAADHRSSCLVKIKDDRQLSREYVVDLVGEPGNVHGPDSSINGAYVCSTPSPIQISHIRESRSPYMNYASSSRFSSSTDSESHLYSGRTKKDQLVKGYDLLKFPVNSKYASVDQTHPVTAEERGALYSNLPSIQEGVPEDLHSAPEALLHVEDSVVTKEISNNEIIVTESPVAKATSKKPILGPSCQSEIEYKDSRLEKRDHFSAGNIPRYVNLEPSLAMDWLEISWDELRIKERVGAGSFGTVHRAEWHGSDVAVKVLTIQDFQDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPASGEILDQRRRLRMALDVAKGINYLHCLSPPIVHWDLKSPNLLVDRNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWNGLSHAQVVGAVAFQNRKLAIPPNISPVLASLMESCWDDDPKKRPSFSSIVESLKKLLRSPVEMIKMGGT 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2192 933 FunFam Serine/threonine-protein kinase CTR1 742 927 - -
Mibi08g2192 933 ProSitePatterns Protein kinases ATP-binding region signature. 669 690 IPR017441 GO:0005524
Mibi08g2192 933 Pfam Ethylene-responsive protein kinase Le-CTR1 259 467 - -
Mibi08g2192 933 Pfam Protein tyrosine and serine/threonine kinase 663 917 IPR001245 GO:0004672|GO:0006468
Mibi08g2192 933 FunFam Serine/threonine-protein kinase isoform 1 653 741 - -
Mibi08g2192 933 MobiDBLite consensus disorder prediction 185 211 - -
Mibi08g2192 933 PRINTS Tyrosine kinase catalytic domain signature 844 866 IPR001245 GO:0004672|GO:0006468
Mibi08g2192 933 PRINTS Tyrosine kinase catalytic domain signature 888 910 IPR001245 GO:0004672|GO:0006468
Mibi08g2192 933 PRINTS Tyrosine kinase catalytic domain signature 737 750 IPR001245 GO:0004672|GO:0006468
Mibi08g2192 933 PRINTS Tyrosine kinase catalytic domain signature 778 796 IPR001245 GO:0004672|GO:0006468
Mibi08g2192 933 CDD STKc_MAP3K-like 669 917 - -
Mibi08g2192 933 MobiDBLite consensus disorder prediction 23 53 - -
Mibi08g2192 933 MobiDBLite consensus disorder prediction 109 152 - -
Mibi08g2192 933 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
Mibi08g2192 933 Coils Coil 199 224 - -
Mibi08g2192 933 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 250 922 - -
Mibi08g2192 933 Gene3D Transferase(Phosphotransferase) domain 1 742 928 - -
Mibi08g2192 933 Gene3D Phosphorylase Kinase; domain 1 656 740 - -
Mibi08g2192 933 ProSiteProfiles Protein kinase domain profile. 663 921 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2192 933 MobiDBLite consensus disorder prediction 54 73 - -
Mibi08g2192 933 SMART serkin_6 663 921 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2192 933 MobiDBLite consensus disorder prediction 16 73 - -
Mibi08g2192 933 SUPERFAMILY Protein kinase-like (PK-like) 636 916 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2192 Mibi-ChrMibi08 39557617 39563733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2192 1 932 MAP Kinase Kinase Kinase AT4G24480 58.256 0.0 1070
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Mibi08g2192 PK_Tyr_Ser-Thr 6.7e-66 CL0016