Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2180 ATGGAGAATCATCCCCTCGCTTCCCACCCTGATTCTCGCCATTCCTCGCCTCACTCTCAAGACACCGACCTTGAGAATCCATCCATGGACGATCCTCTTCCCACCACCACCAACAACCACAAAGTTAAGCTCATGTGCAGTTATGGCGGAAATATCCAATTCAGGACTCACGACAACCAGCTCGCTTATGTCGGCGGCGATACCAAGATCATAACCGTCGATCGCACCATTAAGCTCTCTGCTATGATGACCAAGCTCTCTTCTCTCTGCAACGCCGAAGTTTTCGTCAAGTACCAACTTCCCGGTGAAGATCTCGACGCCTTGATTTCTGTCACTAACGACGAAGATCTAGAGCACATGATGGTCGAGTATGATCTGTCTCAACGTCCGTCGGTGAAACCAACTCGGCTGAGGCTTTTCCTGTTTCCACCAAAACCTTCGTCGTCTTCTCCGACGAGTTTCGAGTCCAACGATTTGAAAACAGAGCATCAATGGTTTGTTGACGCTCTCAATTCCGTTCACATTCCACATCATCATGTTAAGAGCTCCTCAAAATCGGCACCTATTTCGGCTGCGAATCCCGATTTCCTCTCTGGATTAGATTACAGATATTCAGTTGTTTCCGCAACGAAACTGCCTGATTCTGTTAATCCTTCTTCATCAACCGTTCCGCACGTGGAGGCAAACGATTCGCCTACGGAAACGGACGGTGGATCGGAAGATCGGAACATCGCCGGAGAACCGTTAGTATCACCAACTGAGATTCAAACACAGATGGAGGAGTCAGAGAGGTTGAATTTCGAAAACAATGACCTCCGAATCCTACTAAATGGCTGTTGTGAAGACAACAACGGAAAACTCAATAAATCCATGGAACATTACTCTGTGAAAAATCCAGAGTTAAAGGAGATTCCACCGGTTCACAAAATTGTTCCACCTCCGATATCGATTCCGAGATCGGCGGGGGTTTACTCGCCGGAAAGACTCATGACAGGTGCCGGTTATTCGTTACCGGCGTCTGCAACCGTTACAGAGCAACCGTTATATCTCATCGCAACCCCTGCCGTAATGTACCATGCTACTACCGTGAGAGCCGTGACCGGACCTGTGGGTCATCATCATCATCAGCCATACTATCGAGTTCCGAGAATGGTCCAAACAAGTGAATTCTACAATAATGGAGCACCATTGGCTTCAATTTCTCTTTCACATTCACAGTCAAGGATTGGGGCTAATGGCGTTGAAAGTGGTTCGATTGTACAGCAGAAGGTTGAGGTGGCAGAGGCTGCGAGTGGTTACCCACAGATGGTGTATGAGGACACTGGAAGGCAGGTGTTTATTGCGGCGGCTCCGGCTGCTTGGGGTGGGGTGGCGCCGCCGCACAGAGAGGTGGCTGCTGGAAGTGATGGGGCACAATGCGGTGTAGGCGGGAATTTGAATCAGGAAGGAGGGAAGGTTTCTAAATTGGCTTCGGCTGTATGA 1482 0.4933 MENHPLASHPDSRHSSPHSQDTDLENPSMDDPLPTTTNNHKVKLMCSYGGNIQFRTHDNQLAYVGGDTKIITVDRTIKLSAMMTKLSSLCNAEVFVKYQLPGEDLDALISVTNDEDLEHMMVEYDLSQRPSVKPTRLRLFLFPPKPSSSSPTSFESNDLKTEHQWFVDALNSVHIPHHHVKSSSKSAPISAANPDFLSGLDYRYSVVSATKLPDSVNPSSSTVPHVEANDSPTETDGGSEDRNIAGEPLVSPTEIQTQMEESERLNFENNDLRILLNGCCEDNNGKLNKSMEHYSVKNPELKEIPPVHKIVPPPISIPRSAGVYSPERLMTGAGYSLPASATVTEQPLYLIATPAVMYHATTVRAVTGPVGHHHHQPYYRVPRMVQTSEFYNNGAPLASISLSHSQSRIGANGVESGSIVQQKVEVAEAASGYPQMVYEDTGRQVFIAAAPAAWGGVAPPHREVAAGSDGAQCGVGGNLNQEGGKVSKLASAV 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2180 493 SMART PB1_new 56 144 IPR000270 GO:0005515
Mibi08g2180 493 MobiDBLite consensus disorder prediction 213 233 - -
Mibi08g2180 493 SUPERFAMILY CAD & PB1 domains 57 150 - -
Mibi08g2180 493 Pfam PB1 domain 57 143 IPR000270 GO:0005515
Mibi08g2180 493 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 61 144 - -
Mibi08g2180 493 CDD PB1_UP2 45 142 - -
Mibi08g2180 493 Gene3D - 62 143 - -
Mibi08g2180 493 MobiDBLite consensus disorder prediction 1 38 - -
Mibi08g2180 493 PANTHER OS05G0427100 PROTEIN-RELATED 9 381 - -
Mibi08g2180 493 MobiDBLite consensus disorder prediction 1 20 - -
Mibi08g2180 493 MobiDBLite consensus disorder prediction 213 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2180 Mibi-ChrMibi08 39299799 39301280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2180 42 173 MAP Kinase Kinase Kinase AT1G04700 42.254 1.32e-27 115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2180 08 39299799 39301280 Mibi08g2180 08 39299799 39301280 ECH