Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2175 ATGGCTTTGTTTGAACATGATTTCTTGGACGAAATACTAGCTCTAAGAAGAGAAGCATTCTGTGAGACATTTCCAAGTCCAAATGAAGAAAACCAATTTTTCTTCCCTAATGCTTATAATAGTTTGGATTATTTTGATCCAAACTCTCTTGCTTTTCTTCCAAATTCCTTCTCTGATCAACAGGTATCTCAAAGCTACAACAATAATAGCTTGAACGAAATCTACAACTCATTACTTGATGAGTTCTCTACGCCCCAGATTATAGATTCATCACCACCCTATACCACTATCGATACCACTTCTTCTTCACTAAGCACTACCCCTCCTTTTGTGGTTCAAGAAGAGAATAATTATAATCCTTTATTGTCGTCCATTATGAATATGGAAGAAGGGGGCTTGTTTGGAGGAGAAGAGCATCAGAGTTTGGAGCTCAAAACGACATGTAAGATAGAGCCCACAAGCCATTCTTCTCCTGAAACGACAATGCCAGTTTTCAACATGGGGCGCTCTTGTAATTTGGAGAGAAAGAATAATCGGCCCAATAAGAAGATTCTGGGACAGCCTTCCAAGAATTTAATGGCTGAGAGGAGAAGAAGGAAGAGGCTAAATGATCGTCTCTCCATGCTAAGATCTATTGTCCCCAAGATTAGTAAGATGGATAGAACATCTATTCTTGGAGATACAATAGACTACATGAAAGAACTTCTGGAGAAGATTAAAGATTTGCAGCAAGAAATAGACTTTGACAATTCAAACATGGCTAGCGTTTTGAAGGATGCCAAACCAAATGAAATCATAATGAGAAATTTGCCCAAGTTTGATGTGGAGAGAAGGAAAGTGGACACGAGGGTTGAAATATGCTGTGCAGGGAAGCCAGGCTTGTTACTATCCACAGTGAACACATTGGAAGCATTTGGGCTTGAGATTCATCAATGTGTCATCAGCTGCTTCAATGATTTTACTATGCACGCTTCTTGCTCCGAGGAATTGGAGGGCAGGACAATAGTGGGTTCGGGAGATATAAAGCAAGCGTTGTTTAGAAGCGCAGGATATGGAGGAAGATGTTTGTGA 1071 0.4006 MALFEHDFLDEILALRREAFCETFPSPNEENQFFFPNAYNSLDYFDPNSLAFLPNSFSDQQVSQSYNNNSLNEIYNSLLDEFSTPQIIDSSPPYTTIDTTSSSLSTTPPFVVQEENNYNPLLSSIMNMEEGGLFGGEEHQSLELKTTCKIEPTSHSSPETTMPVFNMGRSCNLERKNNRPNKKILGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYMKELLEKIKDLQQEIDFDNSNMASVLKDAKPNEIIMRNLPKFDVERRKVDTRVEICCAGKPGLLLSTVNTLEAFGLEIHQCVISCFNDFTMHASCSEELEGRTIVGSGDIKQALFRSAGYGGRCL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2175 356 Gene3D - 181 251 IPR036638 GO:0046983
Mibi08g2175 356 CDD ACT_UUR-ACR-like 282 322 - -
Mibi08g2175 356 SMART finulus 192 241 IPR011598 GO:0046983
Mibi08g2175 356 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 77 350 - -
Mibi08g2175 356 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 186 235 IPR011598 GO:0046983
Mibi08g2175 356 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 190 249 IPR036638 GO:0046983
Mibi08g2175 356 Coils Coil 225 252 - -
Mibi08g2175 356 Pfam Helix-loop-helix DNA-binding domain 192 235 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2175 Mibi-ChrMibi08 39241902 39243310 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2175 174 356 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 63.441 1.01e-68 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi08g2175 HLH 7.7e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2175 08 39241902 39243310 Mibi08g2175 08 39241902 39243310 ECH