Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2163 ATGTTCCTTCCCTCCACCTTCCACCGTGTCTCTTCCCTCCTTCCCTTCCTCTGTTTCGCTTCAATCCTCTCCGTAGTAAACTCCGTTGAACCAGAACGTCAACTTCTCCTAAACCTTAAGTCATCTCTCCAGGAATCAAATCCCACCGTGTTTGACTCGTGGACAGATTCCAACTCAGTATGCAGCTTCAATGGAATCACGTGTGACTCAGGCGGTTCTGTCACCGGAATCGATCTCTCCAATCACATGCTTTCTGGGATTATTCCTTTTGATTCAATTTGCCAGCTTCAATCACTCGAGAAGCTCTCACTTGGGTTCAATTCACTGTATGGAAATATCTCCAAGGATTTGAGCAACTGTGTCAGATTGAAGTACTTGGATTTGGGCAATAACATTTTCTCCGGGTCATTCCCTGACATTTCTACCCTCACTCAGTTGCAGTTTCTGTATTTAAATCAGAGTGGCTGTTCTGGATTTTTCCCATGGAAGTCCCTGCAAAATATGGCCAGTCTTGAGGTATTAAGTGTTGGAGATAACCCTTTCAGTCTTACTCCTTTTCCCACCGAAGTTGTGAAGCTCAAGAATTTGACATGGTTATATATGTCAAATTGCACTCTTGGTGGGAAAATACCAATAGGGATTGGTAATCTTACCAAGCTCATAAACTTGGAGTTTTCCGACAACTTTATATCTGGGGAGATTCCTTCAGAGATCGGGAATCTTCAGAAGCTATGGCAGCTTGAGATGTACAACAATTCATTCACTGGGAAGATTCCATATGGGTTAAGAAATCTCACAAAGTTAGAGTACTTTGACGCTTCAATGAATAATCTGGGAGGCAATCTTTCTGAATTGAGGTTCTTAAACAATCTCGTTTCTCTGCAATTATTTGAAAACGAATTCTCTGGGGAAATCCCACCCGAGTTTGGTGAATTCAGGAAGCTCGTGAACCTATCCTTATACAGAAACAGCTTGACTGGTCCAATTCCTCAAAAGATTGGATCCTGGGCTCAGTTCGATTACATCGATGTGTCCGAGAATTTCTTGTCGGGTCCTATTCCTCCAGATATGTGCAAGCAGGGGAAGATGCACTCTCTCCTAGTACTTCAAAACAAACTCACAGGTGAAATTCCTGCCACATATTCCAATTGTTCATCTATGCGCCGATTCAGAGTGAGCAATAATTCTCTCTCTGGTGTTGTACCTTCTGGGATTTGGGGGTTGCCAAACGCAGAAATTATCGATATTGAATTGAATCGGTTGGGAGGTTCAATTTCTTCAGATATAAAGAATGCGAAGACTCTGGCCCAAATATATGCAAGTCAAAATCTTTTATCCGGTGAGATACCTGAAGAGATTTCAAAAGCTACCTCCTTAGTGACAGTTGACTTGAGCTATAATCAAATTTCTGGGGATATTCCGACGAATATTGGTGAGCTTAAACAATTAAGCAGTTTAGATTTACAGAGCAACAAGTTATCTGGGTCAATCCCAGATTCTCTTGGTTCATGCGTATCCCTCAGCGACATCAACCTATCAGAAAATTCACTGTCGGAAAATATGCCTTCTTCTCTGGGATTCTTACCAGTTCTCAATTCTCTAAACCTGTCAAGAAATGAACTTTCAGGTGAAATCCCGACGAGTTTTTCACGTCTCCGATTGAGCCTCTTTGATTTATCAAACAACAAATTATCAGGTCCAATTCCATTAACTCTATCTTTTCAAGCTTACAATGGAAGCCTGGATGAAAACCCCAACCTTTGTACCATGGACGTTGAAGTCACCTCCTTTAAGCGTTGCTCCGTACATCCAAACATTTCCAGACATATCAGAACACTTCTCGTTTGCTTCTCAATAGGCTTAATCATGATCTTCCTTTGTGTAAGCCTTTACGTGCAACTAAAGAAGAAGGAGGAATATCGAGAACGTTCTCTAAAGGAAGAATCTTGGGACATAAAATCCTTCCACGTGTTAAGCTTTACAGAGGACGAGATTCTAGATTCCATCAAGCAAGAGAATCTCATAGGAAAAGGAGGATCTGGGAATGTCTACAGAGTCGCTCTCTCCAATGGGAAAGACCTCGCCGTTAAGCACATATGGAACACCGACACTACCGGTGGTCGGAAAAGGGGCCGGAGTAGTGCTCCGATGATCGGAAAACGTGGGGAGAAATCAAAGGAATTTGATGCAGAAGTTCAGGCATTGAGCTCAATAAGGCATGTCAATGTGGTGAAGCTGTATTGTAGTATAACAAGCGAGGATTCAAATTTGTTGGTGTATGAATATTTGCCAAATGGGAGTTTGTGGGATATGCTTCACATGAATAGGAAGATGGAGCTTGATTGGGAGACAAGGTACGAGATTGCCGTTGGATCAGCGAAAGGTTTGGAGTATCTTCACCATGGAATTGAGAGGCCTGTAATTCATAGGGACGTTAAGTCAAGCAACATTTTGTTGGATGAGTTTTTGAAGCCCAGAATTGCTGACTTTGGATTAGCCAAGATTGTTCAAGCCAACGTTGGCAAGGATTCCACCCATCATCTAGTTGCTGGGACTCATGGCTATATTGCCCCCGAATATGGGTACACTTACAATGTGAATGAGAAGAGTGATGTTTATAGTTTTGGAGTGGTGTTGATGGAGCTGGTGACGGGGAAGAGGCCGATCGAGCTGGATTTTGGGGAGAAGGAGGACATAGTGAATTGGGTGTGCAGCAAAGTGCAGCAAGAGAACAAGGAGAAGATAATGGGGATGGTGGATTCAAGAATAGGAGAGGTGAACAGAGAGGAGGCTATGAAGGTACTGAGGATAGCTATAATGTGTACGGCTAGGGTTCCTGCGGTGAGACCAAGCATGAGAAGCGTGGTTCAAATGCTGGAAGATGTTGAGCCTTGTAAGTTGCTGGGAATTGTGGTAACCAAAGATGGTGATTCTGCTAAGAAAGTAGTGCAGCTTCATGAGGCTGCAAAACTCCCATAA 2979 0.43 MFLPSTFHRVSSLLPFLCFASILSVVNSVEPERQLLLNLKSSLQESNPTVFDSWTDSNSVCSFNGITCDSGGSVTGIDLSNHMLSGIIPFDSICQLQSLEKLSLGFNSLYGNISKDLSNCVRLKYLDLGNNIFSGSFPDISTLTQLQFLYLNQSGCSGFFPWKSLQNMASLEVLSVGDNPFSLTPFPTEVVKLKNLTWLYMSNCTLGGKIPIGIGNLTKLINLEFSDNFISGEIPSEIGNLQKLWQLEMYNNSFTGKIPYGLRNLTKLEYFDASMNNLGGNLSELRFLNNLVSLQLFENEFSGEIPPEFGEFRKLVNLSLYRNSLTGPIPQKIGSWAQFDYIDVSENFLSGPIPPDMCKQGKMHSLLVLQNKLTGEIPATYSNCSSMRRFRVSNNSLSGVVPSGIWGLPNAEIIDIELNRLGGSISSDIKNAKTLAQIYASQNLLSGEIPEEISKATSLVTVDLSYNQISGDIPTNIGELKQLSSLDLQSNKLSGSIPDSLGSCVSLSDINLSENSLSENMPSSLGFLPVLNSLNLSRNELSGEIPTSFSRLRLSLFDLSNNKLSGPIPLTLSFQAYNGSLDENPNLCTMDVEVTSFKRCSVHPNISRHIRTLLVCFSIGLIMIFLCVSLYVQLKKKEEYRERSLKEESWDIKSFHVLSFTEDEILDSIKQENLIGKGGSGNVYRVALSNGKDLAVKHIWNTDTTGGRKRGRSSAPMIGKRGEKSKEFDAEVQALSSIRHVNVVKLYCSITSEDSNLLVYEYLPNGSLWDMLHMNRKMELDWETRYEIAVGSAKGLEYLHHGIERPVIHRDVKSSNILLDEFLKPRIADFGLAKIVQANVGKDSTHHLVAGTHGYIAPEYGYTYNVNEKSDVYSFGVVLMELVTGKRPIELDFGEKEDIVNWVCSKVQQENKEKIMGMVDSRIGEVNREEAMKVLRIAIMCTARVPAVRPSMRSVVQMLEDVEPCKLLGIVVTKDGDSAKKVVQLHEAAKLP 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2163 992 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 22 959 - -
Mibi08g2163 992 Gene3D Ribonuclease Inhibitor 358 604 IPR032675 -
Mibi08g2163 992 Pfam Protein kinase domain 671 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2163 992 ProSitePatterns Serine/Threonine protein kinases active-site signature. 807 819 IPR008271 GO:0004672|GO:0006468
Mibi08g2163 992 SMART serkin_6 669 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2163 992 FunFam Inactive leucine-rich repeat receptor-like protein kinase 382 474 - -
Mibi08g2163 992 SUPERFAMILY RNI-like 74 335 - -
Mibi08g2163 992 FunFam Leucine-rich receptor-like protein kinase family protein 186 284 - -
Mibi08g2163 992 SUPERFAMILY L domain-like 283 618 - -
Mibi08g2163 992 FunFam Probable inactive receptor kinase RLK902 29 185 - -
Mibi08g2163 992 Gene3D Ribonuclease Inhibitor 188 285 IPR032675 -
Mibi08g2163 992 SUPERFAMILY Protein kinase-like (PK-like) 659 960 IPR011009 -
Mibi08g2163 992 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 475 596 - -
Mibi08g2163 992 Gene3D Ribonuclease Inhibitor 286 357 IPR032675 -
Mibi08g2163 992 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 763 973 - -
Mibi08g2163 992 Gene3D Ribonuclease Inhibitor 28 187 IPR032675 -
Mibi08g2163 992 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Mibi08g2163 992 FunFam Leucine-rich receptor-like protein kinase family protein 285 381 - -
Mibi08g2163 992 FunFam Receptor-like protein kinase HAIKU2 652 762 - -
Mibi08g2163 992 SMART LRR_sd22_2 265 284 - -
Mibi08g2163 992 SMART LRR_sd22_2 480 501 - -
Mibi08g2163 992 SMART LRR_sd22_2 217 243 - -
Mibi08g2163 992 SMART LRR_sd22_2 96 119 - -
Mibi08g2163 992 Gene3D Phosphorylase Kinase; domain 1 653 762 - -
Mibi08g2163 992 Gene3D Transferase(Phosphotransferase) domain 1 763 968 - -
Mibi08g2163 992 ProSitePatterns Protein kinases ATP-binding region signature. 675 697 IPR017441 GO:0005524
Mibi08g2163 992 Pfam Leucine rich repeat 458 517 IPR001611 GO:0005515
Mibi08g2163 992 ProSiteProfiles Protein kinase domain profile. 669 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2163 Mibi-ChrMibi08 39127854 39130982 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2163 7 983 Receptor kinase-like Gene Family AT1G09970 62.322 0.0 1189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi08g2163 Pkinase 2.7e-42 CL0016