Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2143 ATGGCCATCGCAACAGAGACCCAGCCTCAGCCTCAGCCTCCTTCTCACGACAAGACTTCTTCAGAGGTTTCTGCTGTCGAGAACAAAAGGTGGACCCTCAATGACTTTGATATAGGAAAGCCTCTTGGAAGGGGAAAATTTGGTCATGTGTATTTGGCCAGAGAGAAGAGAAGTAATCATATTGTTGCTCTGAAAGTCCTCTTCAAGAGCCAATTGCAACAGTCCCAAGTAGAGCATCAACTTAGGCGAGAAGTTGAAATCCAAAGTCATCTGCGACACCCCAATATTTTACGCCTTTATGGATACTTTTATGATCAGAAACGAGTTTATTTGATTTTGGAGTATGCACCCAAAGGTGAACTTTACAAGGAATTACAAAAATGCAAATATTTCAGTGAAAGACGTTCAGCTACTTACGTTGCTTCACTGGCCCGAGCCCTCATTTATTGCCATGGAAAGCATGTAATACATAGGGACATTAAACCTGAGAACCTTCTCATTGGCGCCCAGGGTGAACTGAAAATTGCAGACTTTGGGTGGTCAGTGCACACATTTAACCGCAGGCGGACCATGTGTGGAACGCTAGATTACCTTCCTCCTGAGATGGTGGAAAGCGTAGAACATGATGCAAGTGTTGATATATGGAGCCTTGGTGTCTTGTGTTATGAGTTTCTCTATGGAGTCCCTCCTTTTGAGGCTAAAGAACATTCTGAGACATACAGAAGAATAATCCAAGTAGATCTCAAGTTCCCGCCCAAACCAATTGTGTCCTCTGCTGCAAAGGACCTCATCAGTCAGATGCTGGTGAAGGATTCCTCTCAACGCCTACCATTACACAAGCTTCTGGAACATCCTTGGATTGTACAGAACGCAGAGCCCTCTGGTGTATACAAGTGCTAG 900 0.4456 MAIATETQPQPQPPSHDKTSSEVSAVENKRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEYAPKGELYKELQKCKYFSERRSATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDASVDIWSLGVLCYEFLYGVPPFEAKEHSETYRRIIQVDLKFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIVQNAEPSGVYKC 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2143 299 ProSiteProfiles Protein kinase domain profile. 36 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2143 299 PIRSF ILK 4 284 - -
Mibi08g2143 299 CDD STKc_Aurora 35 288 - -
Mibi08g2143 299 ProSitePatterns Protein kinases ATP-binding region signature. 42 65 IPR017441 GO:0005524
Mibi08g2143 299 MobiDBLite consensus disorder prediction 1 24 - -
Mibi08g2143 299 Pfam Protein kinase domain 38 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2143 299 FunFam Aurora kinase A 28 119 - -
Mibi08g2143 299 SUPERFAMILY Protein kinase-like (PK-like) 18 291 IPR011009 -
Mibi08g2143 299 Gene3D Transferase(Phosphotransferase) domain 1 120 296 - -
Mibi08g2143 299 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 9 297 IPR030616 GO:0004672
Mibi08g2143 299 FunFam serine/threonine-protein kinase Aurora-1 120 295 - -
Mibi08g2143 299 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Mibi08g2143 299 SMART serkin_6 36 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2143 299 Gene3D Phosphorylase Kinase; domain 1 24 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2143 Mibi-ChrMibi08 38904856 38907189 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2143 27 298 CBL-interacting serine-threonine protein kinases AT5G10930 35.125 2.40e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Mibi08g2143 Pkinase 1.9e-73 CL0016