Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2130 ATGCCTGAACTGCGCAGCAGAGCGCGCAGGAACCGGACATTTCATAATCCAATTGCCAAATCGCACAGGCCCACGGTAAAAACTCGTCAGAGAAGGAGAACAAAGGTGCAAAACAGAGAGAATCCGCAGCAGAAGAACACGATCGGGGTTGATGAAACTGATGATATTGTGAGTAAGGACGTTGGTGACATTCCTGAAACGAGGACGTTGGGAGATAAGGAAGGAAAAGAACAAGGACAAGCGCTAGACGTAGAGCTTAGGGTTTTTAGAGAGAAAGTTGGGGATAAAGCCATGGATGATTACGATAGTGGTGATCATAGTCCCGATAAGGCTCCGGTTGCTGAAGACGAGGGCTGCACAGCTCCGTTACCTGAGAAGGTGGTCCAGGTTGGTGGTTCACCAACATACAGAATTGATAGAAAATTGGGAAAAGGAGGATTTGGACAAGTCTATGTTGGCAGACGTGTTAATGTAACAAATCCCACTGAACTGACCGGTTCTGGAGCTGTAGAGGTGGCCTTAAAGTTTGAGCATAGAAGCAGTAAAGGCTGCAACTATGGACCACCATATGAGTGGCAGGTTTACAATGTGTTGGGTGGTAGTCACGGTGTTCCAAGAGTTCATTATAAGGGGAGGCAGGGTGATTATTATATTATGGTGATGGATATGCTTGGCCCTAGTCTTTGGGATGTATGGAATAACAACTCTCACACGATGTCTATAGAAATGGTAGCTTGTATTGCCATTGAGGCAATATCCATATTAGAGAAGATGCATTCTAGAGGGTATGTGCATGGTGATGTAAAGCCTGAGAACTTCTTGCTTGGGCCTCCTGGAACTCCTGATGAGAAGAAGCTGTTTCTCGTTGATCTGGGATTAGCTACCAGATGGCGCGATAACTCAACAGGCCTACATGTTGAGTATGATCAACGCCCGGATGTATTTAGGGGGACAGTACGATATGCTAGTGTGCATGCTCATCTTGGCAGAACTGGCAGCAGAAGAGATGACTTGGAATCTCTTGCTTACACACTGATCTTCCTTCTTCGTGGTCGGCTTCCATGGCAAGGATATCAGGGAGAAAACAAAGGATTTCTTGTCTGCAAGAAGAAGATGGCCACATCTCCAGAAACTTTGTGCTGTTTTTGTCCCCAACCCTTTCGACAGTTTGTTGAGTATGTTGTGAATTTGAAGTTTGATGAAGAACCAAATTATGCAAAGTACATCTCCCTTTTTGATGGAATTGTTGGTCCGAATCCAGACATTAGGCCGATTAATACCGAGGGTGCACAGAAACTTATATTTCAGGTTGGCCATAAGAGAGGACGATTGACCATAGAAGATGACGATGACGAACAACCAAAGAAGAAGGTCAGAATGGGAATGCCAGCAACTCAATGGATCAGTGTTTACAATGCTCGTCGACCGATGAAGCAAAGGTATCATTACAATGTGGCAGACATGCGTCTGTCCCAACACATTGAGAAAGGAAATGAGGATGGGTTATTAATAAGCAGTGTGGCTTCTTGTTCCAATCTTTGGGCACTTATCATGGATGCTGGCACTGGTTTCTCTTCACAAGTTTATGAACTCTCACCCTATTTTCTTCATAAGGAATGGATTATGGAACAATGGGAAAAAAATTATTACATCAGTGCTATAGCTGGGGCTAACAATGGAAGCTCATTGGTTGTGATGTCTAAAGGGACCCAGTACTTGCAGCAGTCCTATAAAGTCAGCGATTCATTCCCATTTAAGTGGATTAATAAAAAATGGAGAGAGGGTTTTTATGTCACTGCGATGGCAACTGCTGGAAGCAGATGGGCAATTGTCATGTCCCGCGGTGCAGGATTTTCGGATCAGGTTGTGGAACTCGATTTTCTGTATCCCAGTGAAGGTATTCATCGGAGGTGGGATAATGGTTACCGCATCACATCTACTGCAGCTACATGGGACCAAGCTGCTCTTGTTCTTAGTGTCCCAAGAAGAAAACCAGCTGATGAAACTCAAGAGACTCTTCGCACATCTGCTTTCCCTAGTACTCATGTTAAGGAAAAATGGGCCAAGAACTTGTATATAGCATCTATTTGTTATGGGAGAACAGTTTCATGA 2112 0.4441 MPELRSRARRNRTFHNPIAKSHRPTVKTRQRRRTKVQNRENPQQKNTIGVDETDDIVSKDVGDIPETRTLGDKEGKEQGQALDVELRVFREKVGDKAMDDYDSGDHSPDKAPVAEDEGCTAPLPEKVVQVGGSPTYRIDRKLGKGGFGQVYVGRRVNVTNPTELTGSGAVEVALKFEHRSSKGCNYGPPYEWQVYNVLGGSHGVPRVHYKGRQGDYYIMVMDMLGPSLWDVWNNNSHTMSIEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATRWRDNSTGLHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPETLCCFCPQPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTEGAQKLIFQVGHKRGRLTIEDDDDEQPKKKVRMGMPATQWISVYNARRPMKQRYHYNVADMRLSQHIEKGNEDGLLISSVASCSNLWALIMDAGTGFSSQVYELSPYFLHKEWIMEQWEKNYYISAIAGANNGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTAMATAGSRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDNGYRITSTAATWDQAALVLSVPRRKPADETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVS 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2130 703 PANTHER CASEIN KINASE-RELATED 129 669 - -
Mibi08g2130 703 Pfam Protein kinase domain 136 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2130 703 MobiDBLite consensus disorder prediction 1 79 - -
Mibi08g2130 703 CDD STKc_CK1 136 412 - -
Mibi08g2130 703 ProSiteProfiles Protein kinase domain profile. 136 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2130 703 MobiDBLite consensus disorder prediction 52 79 - -
Mibi08g2130 703 MobiDBLite consensus disorder prediction 11 34 - -
Mibi08g2130 703 SUPERFAMILY Protein kinase-like (PK-like) 135 416 IPR011009 -
Mibi08g2130 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Mibi08g2130 703 ProSitePatterns Protein kinases ATP-binding region signature. 142 175 IPR017441 GO:0005524
Mibi08g2130 703 Gene3D Transferase(Phosphotransferase) domain 1 105 452 - -
Mibi08g2130 703 SMART serkin_6 136 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2130 703 MobiDBLite consensus disorder prediction 97 117 - -
Mibi08g2130 703 FunFam casein kinase 1-like protein HD16 108 459 - -
Mibi08g2130 703 MobiDBLite consensus disorder prediction 97 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2130 Mibi-ChrMibi08 38798482 38802536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2130 141 412 MAP Kinase Kinase Kinase AT5G50180 23.509 2.26e-08 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Mibi08g2130 Pkinase 2.3e-15 CL0016