Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2127 ATGTTCTTTGATGGGCTCGTTCTTACAAAGCTTGGGATCCGAGGATTGATTCAAATACGAAGAGATCATAGTACTCCAGTACTGATAACAACAAACATGGCTCAAACTGAATCAAGGTGGTGCATCAGGTTTATGTGTATCCTCATCATGTTGATGATGGAGATGAACCATGTTGCGTCATCCCATGTGAAGAAAGAAGAAGAAGAAGAAGAAGCAGAGATTCTATTGTCGTTCAAGGCTTCCATTAACGACCCACTTCACCATCTCTCAAATTGGGTTGTCATCAATAATTCCTCTTCTGCCACTTTCTGCCACTGGAATGGTATCACCTGCGACAGTAACAACTCCCACGTTCGCGCCGTTAATCTCTCCTCCAAGAACATCTCCTCCAATAATAACAATATTTCCTCCATATTTCAACTCCTACACGTTGAACACATTGACCTCTCCGATAATCAACTCTCTGGAGGAATCTCTTTCTCACTCTCTTCACTTCTCTATCTTAATCTTAGTAACAACAATTTCACTGGTCTTGTCCCATTATCATTTTCCCGAATCCAAAGTTTGGATCTTTCCAACAACATGTTTTCAGGGGGAATATCCCATCAAATTGGATCTCTTACTAGTCTGAGGTATGTGGATCTTGGAGGGAACGTTCTGGTGGGGAAGATTCCTGATTCTGTCACTAACATGACAGGTTTAGAGTATTTAACCTTGGCTTCCAACCAGCTTGTGGGTGAAATCCCTCCAAAAATTGGCCTTATGAAGAACTTGAAGTGGATTTACTTCGGCTACAACAATCTCTCTGGTGAGATTCCAGAGGGAATGGGAGAACTGAGAAATTTGAACCATCTTGATCTTGTTTACAACAACCTCACAGGACACATTCCTGACTCTCTTGGAAACCTCACTGATCTTGAATATCTTTTCCTCTACCAAAACAAGCTCACAGGTCGGATTCCGCCGTCTATTTTTGGGCTTAGGAAGCTTGTTTCGCTTGATCTAAGTGATAATTTTCTGTCTGGTGAGATTCCCAAGCAAGTAATTCAGCTTCAGAGGCTAGAAATCCTGCACCTTTTCTCCAACAACTTAACAGGCAAGATTCCAAACGCTATAACCTCTCTGCCTCGTCTCCAAGTTCTTCAGCTATGGTCTAATGGATTAACAGGTGAGATCCCAGAGGATTTGGGAAAACATAACAACCTCTCTGTTCTTGACCTTTCCACCAACAAACTTTCTGGGAAAATCCCACATAGTTTATGTCACTCTGGCTCTCTTTACAAGCTTATCCTTTTCTCCAACTCTCTTCATGGGGAAATACCAAAAAGCTTAGCCTCTTGCACAAGCTTGCGCCGAGTTCGTCTTCAGAACAACAAGTTCTGTGGTGAACTACCATCCCAACTAACTCAACTGCCACTTGTATACTTATTGGACATCTCCAATAACCAACTCTCCGGCAGAACTGATGATAGGCAATGGAATATGTCATCACTTCAAATGTTGAATTTGAGTAACAACAATTTCTCCGGCGAGTTACCAAACACTTTTGGTAGCACAAAATTGGAGAAAATTGACTTATCAGAAAATCAATTTTCTGGTAACATTCCACGTGGGTTTGGAAGTTTATCGGAGATGATGCAATTGAGCCTGAGCAATAACAATCTACATGGTGAAATCCCACAAGAGCTCACTTTCTGCAGAAAGCTTGTTCTTTTAGATGTCAGTCACAATCAACTCACCGGTCAAATTCCGACAAGTCTCGCCGACATGCCGGTTTTGAGCTTGCTGGATTTATCGGATAACCAATTATGTGGTCAAATTCCAGAAAATTTAGGAAGAGTGGAATCTCTAGTTCAGGTAAACATTTCCCACAACCACCTTAATGGACATTTACCGGCCACCGGAGCTTTCCTCGGCATTAATGCCAGCGCCGTCACCGGTAACAACCTGTGCGGCGGTTTCGGTGAAACTTCAAGCATGTTACCGCCATGCAAAAAAATTGACAAGAATCCATGGTTTGTAGTACTCTGGTGTGTGGTGGGATTTTCTGGGTTTGCATTAGCAGGGTTTTTAGTTACATTTTGGCGTAAAAGGAAGAGTTTTGAGGTGAAGAGAGTGATGGAGAGAGAGGATGGTACATGGGAGATTCTATTTTTCCATCCCAAGTTTGCGAAATTGATGACGATGGACGATGTTTTTTCATCAGTGAAAGCAGGGAACGTGATATCCAGAGGGAAAAACTGGGTTTCATACGAAGGGAAGTGCATGGGAAGTGGCATGCAATTTGAGGTGAAGGAAATCAAAGACTTGAATTCAGTTCCTTTGAGTTTCTGGGAAGAAATGGTGGAATTGGGTAAACTCCGGCATCCAAATATTTTTAGACTGATGGGAGTATGTCGTTCTGGTAAAGGAGCATTTTTGGTGTATGAAGATGCAGAAGGAAGGAATCTGAGTCAAGTTGTGAAGAATCTGAGCTGGGGTAATCGCCGGAAAATCGCGGTTGGCATAGCAAAAGCACTAAAGTTCTTGCATGCTCAATGCTCATCGGTTATTTTAGTGGGTGAGATGTCGCCGGAAAACATTATTATCGATGGAAACGACAATCCACGCTTGAAGTTGAGCCCTCCGGCATTGCTTAAGGGCTCCATTTGTTCTCCTTACGTTGCCCCAGAAGCAAGGAATGGGGAGGAAGTGACAGAGAAGAGCGATGTGTATGGATTTGGTGTGATGCTGATAGAACTGTTGACGGGAAGGAGTGGGGTGGGAATGGAAGAAGGGAGCATAGTGGAGTGGGCCCACTACTGTTATTCGGATTGTAATTGGGAAAAGTGGGTCGACCCGACAATGGAAGGTGGGAAGGAAAACGACGTCGTAGAGATCATGAACCTGGCACTCAGCTGCACAGCCATGGATCCCACACAAAGGCCTTGCTCAAGCCAAGTCTTCAAGTCACTCTCTGCTCTTCACTGCTCACACTCTCTTCTCTCTCTTTCTGCACTCTTTCAACCATGA 3012 0.4353 MFFDGLVLTKLGIRGLIQIRRDHSTPVLITTNMAQTESRWCIRFMCILIMLMMEMNHVASSHVKKEEEEEEAEILLSFKASINDPLHHLSNWVVINNSSSATFCHWNGITCDSNNSHVRAVNLSSKNISSNNNNISSIFQLLHVEHIDLSDNQLSGGISFSLSSLLYLNLSNNNFTGLVPLSFSRIQSLDLSNNMFSGGISHQIGSLTSLRYVDLGGNVLVGKIPDSVTNMTGLEYLTLASNQLVGEIPPKIGLMKNLKWIYFGYNNLSGEIPEGMGELRNLNHLDLVYNNLTGHIPDSLGNLTDLEYLFLYQNKLTGRIPPSIFGLRKLVSLDLSDNFLSGEIPKQVIQLQRLEILHLFSNNLTGKIPNAITSLPRLQVLQLWSNGLTGEIPEDLGKHNNLSVLDLSTNKLSGKIPHSLCHSGSLYKLILFSNSLHGEIPKSLASCTSLRRVRLQNNKFCGELPSQLTQLPLVYLLDISNNQLSGRTDDRQWNMSSLQMLNLSNNNFSGELPNTFGSTKLEKIDLSENQFSGNIPRGFGSLSEMMQLSLSNNNLHGEIPQELTFCRKLVLLDVSHNQLTGQIPTSLADMPVLSLLDLSDNQLCGQIPENLGRVESLVQVNISHNHLNGHLPATGAFLGINASAVTGNNLCGGFGETSSMLPPCKKIDKNPWFVVLWCVVGFSGFALAGFLVTFWRKRKSFEVKRVMEREDGTWEILFFHPKFAKLMTMDDVFSSVKAGNVISRGKNWVSYEGKCMGSGMQFEVKEIKDLNSVPLSFWEEMVELGKLRHPNIFRLMGVCRSGKGAFLVYEDAEGRNLSQVVKNLSWGNRRKIAVGIAKALKFLHAQCSSVILVGEMSPENIIIDGNDNPRLKLSPPALLKGSICSPYVAPEARNGEEVTEKSDVYGFGVMLIELLTGRSGVGMEEGSIVEWAHYCYSDCNWEKWVDPTMEGGKENDVVEIMNLALSCTAMDPTQRPCSSQVFKSLSALHCSHSLLSLSALFQP 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2127 1003 Pfam Leucine Rich Repeat 497 517 IPR001611 GO:0005515
Mibi08g2127 1003 Pfam Leucine Rich Repeat 165 184 IPR001611 GO:0005515
Mibi08g2127 1003 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 699 811 - -
Mibi08g2127 1003 SMART LRR_typ_2 327 351 IPR003591 -
Mibi08g2127 1003 SMART LRR_typ_2 495 518 IPR003591 -
Mibi08g2127 1003 SMART LRR_typ_2 542 566 IPR003591 -
Mibi08g2127 1003 SMART LRR_typ_2 231 255 IPR003591 -
Mibi08g2127 1003 SMART LRR_typ_2 590 614 IPR003591 -
Mibi08g2127 1003 SMART LRR_typ_2 375 399 IPR003591 -
Mibi08g2127 1003 SMART LRR_typ_2 162 185 IPR003591 -
Mibi08g2127 1003 SMART LRR_typ_2 279 303 IPR003591 -
Mibi08g2127 1003 SUPERFAMILY L domain-like 104 224 - -
Mibi08g2127 1003 Pfam Leucine rich repeat 280 338 IPR001611 GO:0005515
Mibi08g2127 1003 Pfam Leucine rich repeat 520 579 IPR001611 GO:0005515
Mibi08g2127 1003 Pfam Leucine rich repeat 185 244 IPR001611 GO:0005515
Mibi08g2127 1003 FunFam Leucine-rich repeat receptor protein kinase EMS1 180 273 - -
Mibi08g2127 1003 SUPERFAMILY Protein kinase-like (PK-like) 720 985 IPR011009 -
Mibi08g2127 1003 Gene3D Ribonuclease Inhibitor 222 293 IPR032675 -
Mibi08g2127 1003 PANTHER RECEPTOR-LIKE PROTEIN 55 477 986 - -
Mibi08g2127 1003 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase 360 659 - -
Mibi08g2127 1003 Gene3D Phosphorylase Kinase; domain 1 697 810 - -
Mibi08g2127 1003 FunFam Leucine-rich repeat receptor protein kinase EMS1 274 359 - -
Mibi08g2127 1003 Gene3D Ribonuclease Inhibitor 294 350 IPR032675 -
Mibi08g2127 1003 Gene3D Ribonuclease Inhibitor 351 419 IPR032675 -
Mibi08g2127 1003 Pfam Protein kinase domain 745 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2127 1003 Pfam Leucine rich repeat N-terminal domain 69 112 IPR013210 -
Mibi08g2127 1003 Gene3D Ribonuclease Inhibitor 68 221 IPR032675 -
Mibi08g2127 1003 ProSiteProfiles Protein kinase domain profile. 736 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2127 1003 SUPERFAMILY L domain-like 345 637 - -
Mibi08g2127 1003 Gene3D Transferase(Phosphotransferase) domain 1 813 994 - -
Mibi08g2127 1003 Gene3D Ribonuclease Inhibitor 420 665 IPR032675 -
Mibi08g2127 1003 ProSiteProfiles Leucine-rich repeat profile. 164 185 IPR001611 GO:0005515
Mibi08g2127 1003 SUPERFAMILY L domain-like 183 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2127 Mibi-ChrMibi08 38747207 38751070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2127 71 985 Receptor kinase-like Gene Family AT2G25790 52.295 0.0 893
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Mibi08g2127 Pkinase 1.1e-18 CL0016