Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2125 ATGATGGCGGTGAGCTCGGGATGCAAAGATCAGGGGAGCAAGGTGGTAATGGATAATGGTAAGTACGTGAGGTACACGCCTGAGCAGGTGGAAGCTCTTGAGAGGCTTTACCATGAATGCCCCAAACCCAGTTCCATGCGCCGTCAACAGCTTATCAGAGAATGTCCCATTCTCTCTAACATCGAGCCCAAACAGATCAAGGTTTGGTTCCAGAATCGAAGGTGCAGAGAGAAGCAGAGAAAAGAATCGTCACGTCTGCAAGCTGTGAACAGAAAACTGACGGCCATGAATAAACTGCTGATGGAGGAAAACGACAGATTGCAGAAACAGGTGTCCCAGCTGGTTTACGAGAACAGCTTTTTCCGCCAACAGACTCACAATAATGGGACTGTGGCAACTACAGACACAAGCTGCGAGTCGGTGGTGACGAGTGGTCAGCACCATTTGACACCTCAGCACCCACCAAGGGATGCAAGCCCAGCTGGACTTTTGTCCATTGCGGAAGAGACTCTCGCAGAGTTTCTATCAAAGGCCACTGGAACTGCCGTGGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCATAGGAATCGTTGCTATTTCTCATGGCTGCCCTGGAGTGGCAGCACGTGCATGCGGCCTTGTGGGTCTTGAACCTACGAGGGTTGCTGAAATCCTCAAAGATCGGCCTTCATGGTGTCGTGATTGCCGAGCTGTGGAAGTTCTAAATGCCATGCCCACTGGAAATGAGGGAACTATTGAACTTCTTTACATGCAGTTGTATGCCCCAACAACTTTGGCACCAGCTCGTGACTTCTGGCTGCTGCGTTACACTTCTGTTTTGGAGGATGGTAGTCTTGTGGTGTGTGAAAGATCGCTTAACAACACTCAGAATGGTCCTACCATACCACCGGGGCAGCATTTTGTGAGAGCTGACATGCTGCCAAGCGGGTATCTGATCAGACCTTGTGAAGGAGGTGGATCCATCATTCATATTGTTGACCACGTCAACTTAGAGCCTTGGAGTGTACCTGAAGTGTTACGCCCACTCTATGAATCATCAACGTTGCTTGCTCAAAAAACAGCTATGGCGGCTTTACGTCATTTGAGGCAAATCTCTCAAGAAATTTCTCAGCCAAATGTCAGCGGATGGGGAAGAAGGCCTGCAGCTTTGCGGGCACTGAGTCAGCGTTTGAGCAGGGGCTTCAATGAAGCTGTGAATGGATTTGCAGACGATGGATGGTCCGTGTTAGAAAGTGATGGCATTGATGATGTCACCCTTCTTGTGAACTCATCTCCTAGCAAGACAATGGTAGTAAATATTGGTTATAACAATGGGTTTCTTCCTATGAGCAGCTCTGTACTATGTGCAAAAGCATCCATGTTGTTACAGAATGTCCCTCCTGCAATTCTTCTTAGATTCTTAAGGGAGCATCGATCAGAGTGGGCAGATAGCAATATTGATGCTTACTCAGCCGCTGCCATTAAAGCTGGTCCCTGCACCTTGCCTGGGGTTCGAGCAGGAGGTTTTGGTGGTCAGGTTATTCTTCCACTGGCGCACACAATTGAGAATGAAGAGGCAAGTTGTTTGCCACTAATTTCACCCTAG 1617 0.4898 MMAVSSGCKDQGSKVVMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKESSRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENSFFRQQTHNNGTVATTDTSCESVVTSGQHHLTPQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPTRVAEILKDRPSWCRDCRAVEVLNAMPTGNEGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLNNTQNGPTIPPGQHFVRADMLPSGYLIRPCEGGGSIIHIVDHVNLEPWSVPEVLRPLYESSTLLAQKTAMAALRHLRQISQEISQPNVSGWGRRPAALRALSQRLSRGFNEAVNGFADDGWSVLESDGIDDVTLLVNSSPSKTMVVNIGYNNGFLPMSSSVLCAKASMLLQNVPPAILLRFLREHRSEWADSNIDAYSAAAIKAGPCTLPGVRAGGFGGQVILPLAHTIENEEASCLPLISP 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2125 538 ProSiteProfiles START domain profile. 156 384 IPR002913 GO:0008289
Mibi08g2125 538 SMART START_1 165 375 IPR002913 GO:0008289
Mibi08g2125 538 Pfam Homeodomain 21 79 IPR001356 GO:0003677
Mibi08g2125 538 SMART HOX_1 18 84 IPR001356 GO:0003677
Mibi08g2125 538 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 16 529 IPR044830 GO:0003700
Mibi08g2125 538 Pfam START domain 166 374 IPR002913 GO:0008289
Mibi08g2125 538 CDD START_ArGLABRA2_like 160 375 - -
Mibi08g2125 538 CDD homeodomain 21 81 IPR001356 GO:0003677
Mibi08g2125 538 Gene3D - 13 87 - -
Mibi08g2125 538 SUPERFAMILY Homeodomain-like 20 82 IPR009057 -
Mibi08g2125 538 ProSiteProfiles 'Homeobox' domain profile. 16 80 IPR001356 GO:0003677
Mibi08g2125 538 FunFam Homeobox-leucine zipper protein REVOLUTA 21 76 - -
Mibi08g2125 538 SUPERFAMILY Bet v1-like 165 377 - -
Mibi08g2125 538 CDD bZIP 73 112 - -
Mibi08g2125 538 Coils Coil 86 117 - -
Mibi08g2125 538 Gene3D - 200 380 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2125 Mibi-ChrMibi08 38733995 38737964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2125 17 529 Homeobox Transcription Factor Family AT4G32880 84.825 0.0 929
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mibi08g2125 START 1.6e-53 CL0209