Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2121 ATGACTCCTACAATGAGGGTTGAACTTCAGAATTCTGAAGCAGAGAGCAGTTCAAACTCATTCTCATCTGCACCTACTTCACCATCATCACCCCCATCAAGCAGGGCACTTAAAAACTCTGTCTCACAAGGGAAATCTCATGAACCTGAATCAAAAAAGATAAAACGCATTCGAGACTCCAATAAACATCCTCTGTATCGTGGGGTTCGTATGCGTAGTTGGGGGAAATGGGTTTCTGAAATTCGCGAGCCACGCAAGAAATCTCGCATATGGCTTGGTACATTCTCAACCCCTGAAATGGCCGCAAGAGCACACGATGTTGCTGCTTTAAGCATCAAAGGGAACTCTGCAATTCTCAATTTTCCTCAGCTAGCAAACTCTTTACCTCGTCCTGCCTCTGTCTCTCCTCGAGATATTCAAGTAGCTGCTGCAAAAGCAGCTCAAATGGATCAGTTTGACTCGCCGTCGTCATCGTTATTGTCGTTGTCGTCTTCTTCTTCTTCTTCTTCGATGAACTCGCTGGTTTCGGCAATGGAAATGTGCAGTGGTTCGGAGGAATTGAGCGAGATTATAGAGTTGCCAAGGCTGGAAACAGGGGGGGAGACATGTGAGTTTAGGAAGGAGTTTGTGTTCATGGATTCTTTAACAGATGGATGGATTTATCAGCCACCATGGTTAGAGAACATGGAAGATTGTAATGGGTACGTCGCTGATCAGCTAGGAGAGAGTGGAACTGGAGTCATAAGTAATCTTGATAGTTTGTTCTGGAATAATTACTGA 780 0.4474 MTPTMRVELQNSEAESSSNSFSSAPTSPSSPPSSRALKNSVSQGKSHEPESKKIKRIRDSNKHPLYRGVRMRSWGKWVSEIREPRKKSRIWLGTFSTPEMAARAHDVAALSIKGNSAILNFPQLANSLPRPASVSPRDIQVAAAKAAQMDQFDSPSSSLLSLSSSSSSSSMNSLVSAMEMCSGSEELSEIIELPRLETGGETCEFRKEFVFMDSLTDGWIYQPPWLENMEDCNGYVADQLGESGTGVISNLDSLFWNNY 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2121 259 MobiDBLite consensus disorder prediction 1 62 - -
Mibi08g2121 259 SMART rav1_2 65 128 IPR001471 GO:0003700|GO:0006355
Mibi08g2121 259 MobiDBLite consensus disorder prediction 1 44 - -
Mibi08g2121 259 MobiDBLite consensus disorder prediction 45 62 - -
Mibi08g2121 259 CDD AP2 64 122 IPR001471 GO:0003700|GO:0006355
Mibi08g2121 259 Gene3D AP2/ERF domain 65 123 IPR036955 GO:0003700|GO:0006355
Mibi08g2121 259 SUPERFAMILY DNA-binding domain 65 123 IPR016177 GO:0003677
Mibi08g2121 259 FunFam Ethylene-responsive transcription factor 2 64 123 - -
Mibi08g2121 259 Pfam AP2 domain 64 114 IPR001471 GO:0003700|GO:0006355
Mibi08g2121 259 ProSiteProfiles AP2/ERF domain profile. 65 122 IPR001471 GO:0003700|GO:0006355
Mibi08g2121 259 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 34 198 - -
Mibi08g2121 259 PRINTS Ethylene responsive element binding protein signature 66 77 IPR001471 GO:0003700|GO:0006355
Mibi08g2121 259 PRINTS Ethylene responsive element binding protein signature 88 104 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2121 Mibi-ChrMibi08 38672404 38673183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2121 39 235 AP2-EREBP Transcription Factor Family AT5G11590 62.500 5.75e-68 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi08g2121 AP2 2.2e-13 CL0081