Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2117 ATGAATTGCATAGACATGTGGCTTGAAGGTCACTCTAGCTGCCCTCTTTGTAGGTGCAGAGTAGATTCAGGGGATCTCAAGAGCTTCACTTCTTCAATCATCTCAAGGTTCATGAGAGTCCCTTCCAATTTAACAGAGGAACCAAATCTTGAAATATCTGTGCAGAGGGAACAATCCCTTCAAGTGTCATTGAGAATCAACTCTGGGAGAGGCTTATGGAATGTGGAGGAGGGAAAGAAGGAAGAAGAGCTAGTCATTGATCATAATGGTGGAAATCTGGGAATACTGCACAAGTTCAATCACAGAATAGTTATCTCAGGTTTTGTTACGAGGAGGAGGTGGAGTGATGTTACTGCCAACGGATTTGCTATTCTTAAACCTGGAAATTGGAAATGGTCAGTGTTATGTCGAGCAGAAGATTACAATTGTTCCGAGGTTGGAGGGAATGAACACAATGTGTTATGGTGTCCAGTTGCGAAGCCAACACTGCTAGGATTTGGTAGAGAAGAAAAAAGTTTAACGGAGAGACAATTGAAGGAGACCGAAATGGAAACTTCATATATGGCCTTGGCGGTGAACTGCTGCATTTATCAGAGAAGACACACTGTCCCAAACAGATTTGATCACCCCAGCAACTCACTATCCTCTGTGTTCAAGACAGGTTCCAATTCAATGGAAGCTTTTGTGGATTCCACCTTTGAATTTGTGGACCAGCCATTGCTTCCATCTCAGAGTAACTTTGCTCCGGTGGATGAAGTGGGGGAAGCAGTGGCAATTACCAGCATGGAAGGCCAAGTTCCTGATGGTTTTCCAGATGGTGTCTACATTAGAAATGCCAAGTCTTTGTTTGGGAGGTCAAGTGATATATGGGTGGAAGGCGAAGGAATGATTCATGCTTTATATTTTAGAAAACAGAGTGATGGCAACAGGACTTTGTTGTACAATAGTAAATACGTGGAAACTGATACTTACCTGCTCGAAAGGCACAGAAAGAAACGATCTTTTCTACCAGCCGCAGATGGTGATTCACTCGCTATTTTATCAGCCATTCTTCTAAACTTGCTGAGATTTGGCAAAGTTCACAAAGTGATGAGTAACACGAATGTGTTCGAGCATGCGGGGAAGTCAGCTTCCTTTGATGGTACTATATTGCAGAAAGCTCCGGGTACGGGGGAGCTGGTCACGTGTGGGTTTAACCCGACTAAACCTTACAATGTGGTCGGGATAATCTCCGCTGATGGAACCAGAATGATCCACAAATTGGATGTCAAATTAGAGAGGTGCAGTTTTTGCCATGAGATAGGGGTCACACAGAGATTGCTCAAGTATGAGAAGGAGAAATATGCAAGGATTGGGGTAATGCCTCGCTATGGTGATGCTGACTCCATCAAATGGTTTGGGGTGGAGACCAATTTCACATTTCACATCTTCAACTCATTTGAGGATGGTGATGAGGTCGTGGTGTGGGGTTGCAGAGCTCTTGATTCAGTAGTTCCACTCCCAGAAGAACCTAAAGAGGGTTGGAATAAATTTAAGTTTCCTCATTGTTATGAATGGAGATTAAACATGCAAAGTGGGAAAGTCAAGGAGAGACGTTTGTGTAGAGAACAACATGCAATGGATTTTCCAATGATCAATGCAAAGTTGACAGGTCTCAAGAACAAATTCGGATACGCCCAAGTGGTTGATGTCTCTGCTTCAGCTATTGCGGGCAAGTTTTTGCCTTACCCTGCTTGTGTAATAGGCAAGCCTAAGTGTGGAGGTATAGCAAAGATATATTTTGAAGAACCGTGCACTCAAGTGACCACAGGAAGAAGTGAAGAGGGAATAAGAGTGGAATATCACATGTTTGAGAAGAATGTGTATTCAACTGGAGCTGCCTTCGTCCCTAAAGATGGTGGCATTGAAGAAGATGATGGTTGGCTCATCACTTTTGTTCACAATGAAGACACCGACATATCTCAAGTTCGGATAATTGATGCACACGAATTTTGTGGCGGGAAGACGAGTGCCATAATTAGAATGCCTTGCAGAGTTCCATATGGATTTCACGGAGCTTTCATGCCTATCTCATTTGAAGGATTCCAAGCAGGCGGCTAA 2100 0.4348 MNCIDMWLEGHSSCPLCRCRVDSGDLKSFTSSIISRFMRVPSNLTEEPNLEISVQREQSLQVSLRINSGRGLWNVEEGKKEEELVIDHNGGNLGILHKFNHRIVISGFVTRRRWSDVTANGFAILKPGNWKWSVLCRAEDYNCSEVGGNEHNVLWCPVAKPTLLGFGREEKSLTERQLKETEMETSYMALAVNCCIYQRRHTVPNRFDHPSNSLSSVFKTGSNSMEAFVDSTFEFVDQPLLPSQSNFAPVDEVGEAVAITSMEGQVPDGFPDGVYIRNAKSLFGRSSDIWVEGEGMIHALYFRKQSDGNRTLLYNSKYVETDTYLLERHRKKRSFLPAADGDSLAILSAILLNLLRFGKVHKVMSNTNVFEHAGKSASFDGTILQKAPGTGELVTCGFNPTKPYNVVGIISADGTRMIHKLDVKLERCSFCHEIGVTQRLLKYEKEKYARIGVMPRYGDADSIKWFGVETNFTFHIFNSFEDGDEVVVWGCRALDSVVPLPEEPKEGWNKFKFPHCYEWRLNMQSGKVKERRLCREQHAMDFPMINAKLTGLKNKFGYAQVVDVSASAIAGKFLPYPACVIGKPKCGGIAKIYFEEPCTQVTTGRSEEGIRVEYHMFEKNVYSTGAAFVPKDGGIEEDDGWLITFVHNEDTDISQVRIIDAHEFCGGKTSAIIRMPCRVPYGFHGAFMPISFEGFQAGG 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2117 699 Pfam Retinal pigment epithelial membrane protein 248 375 IPR004294 GO:0016702
Mibi08g2117 699 Pfam Retinal pigment epithelial membrane protein 440 689 IPR004294 GO:0016702
Mibi08g2117 699 SUPERFAMILY RING/U-box 2 22 - -
Mibi08g2117 699 PANTHER BETA-CAROTENE DIOXYGENASE 244 688 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2117 Mibi-ChrMibi08 38595267 38600076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2117 3 125 C3H Transcription Factor Family AT2G20030 34.884 8.75e-15 75.1