Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi08g2112 | ATGGAGAGGATCATTGGAGGGAGGTTTAAGATGGGCAGGAAGATAGGTAGTGGCTCCTTCGGCGAGATTTATATCGCTGCCGATATTCAGACATCTGAGATTGTAGCCGTGAAGATGGAGAGCAAGAAGACTAAACACCCTCAACTGATGTATGAGGCCAAGTTATATAATGCCCTTCAAGGAGGAAGTGGTGTTCCAAGTATGAAATGGTATGGTATCGATGGAGACAGTAATATTATAGTCATGGATCTTTTGGGGCCAAGTCTTGAGGATCTTCTTGTGTACTGCGGGGGGAAGTTTTCATTAAAAACAGTTTTGATGCTGGCTGATCAGATGCTTGTAAGGATAGAGTATCTACATTCTAAGGGATTTTTGCATAGAGACATCAAACCAGATAACTTCCTTATGGGCCTTGGGAGAAAAGCAAATCAGGTTTATATGATTGATTTTGGACTCGCAAAAAGATATAAGGATCCTACAACCAATAAGCATATTGCTTACAGAGAGAACAAAAATTTAACAGGCACTGCCCGGTATGCGAGTTGCAATACTCATTTGGGAATTGAGCAAAGTAGACGGGATGACTTGGAGTCTCTTGGTTATGTCCTTCTTTACTTCTTAAGAGGAAGCCTTCCATGGCAGGGTCTGAGAGCTGCCACTAAAAAGCAGAAATATGACAAGATCTGTGAGAAGAAGTTATCCACTTCAATTGATATCCTGTGCAAGTCTTATCCTGCAGAGTTTGCTTCTTACTTCCACTATTGCCACTCTTTGACGTTTGATCAACGCCCAGATTATGGATTCTTGAAGCGCCTGTTTCGTGATTTATTTACTCGTGAAGGATACGAGTTTGACTTCATATTTGATTGGACCATTCTTAAATTTCAGCAATCACAACAGACAAAGATGAAGGAACAATCAACTCCTGCTGCTGATGTGCCTAGCCGTGCTGAACCAAATGTTGTAGATAAGAGTAAAGGTGTCAACGGTTCTGCTCAAATTGCGGAGGCAAGACCATTAACATTTGTGAATGCACGTGTTAATATGCAGATCAGGACATCACATGATGATCAGAATCTAAATTCAGAGGATCAGATTGTGAAACTTCCAGGGAAAACTGGTCCATCAACAGCTGCGAGGCCTAGAATTGCAGAAAATGTGTCAAAAGCAGAGAAACCAATTGGAAGCTCAAACCCGGGTCGTGCATTTGGGCATAACACTGGCACTTCAAGCACCTGGATTCCTTCACTACGTAGAATTTCTTCGGCCAAAAAATAG | 1278 | 0.4194 | MERIIGGRFKMGRKIGSGSFGEIYIAADIQTSEIVAVKMESKKTKHPQLMYEAKLYNALQGGSGVPSMKWYGIDGDSNIIVMDLLGPSLEDLLVYCGGKFSLKTVLMLADQMLVRIEYLHSKGFLHRDIKPDNFLMGLGRKANQVYMIDFGLAKRYKDPTTNKHIAYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLRAATKKQKYDKICEKKLSTSIDILCKSYPAEFASYFHYCHSLTFDQRPDYGFLKRLFRDLFTREGYEFDFIFDWTILKFQQSQQTKMKEQSTPAADVPSRAEPNVVDKSKGVNGSAQIAEARPLTFVNARVNMQIRTSHDDQNLNSEDQIVKLPGKTGPSTAARPRIAENVSKAEKPIGSSNPGRAFGHNTGTSSTWIPSLRRISSAKK | 425 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi08g2112 | 425 | MobiDBLite | consensus disorder prediction | 400 | 425 | - | - | |
| Mibi08g2112 | 425 | MobiDBLite | consensus disorder prediction | 386 | 425 | - | - | |
| Mibi08g2112 | 425 | SMART | serkin_6 | 9 | 278 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mibi08g2112 | 425 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 337 | - | - | |
| Mibi08g2112 | 425 | SUPERFAMILY | Protein kinase-like (PK-like) | 4 | 290 | IPR011009 | - | |
| Mibi08g2112 | 425 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 124 | 136 | IPR008271 | GO:0004672|GO:0006468 | |
| Mibi08g2112 | 425 | ProSiteProfiles | Protein kinase domain profile. | 9 | 277 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mibi08g2112 | 425 | Pfam | Protein kinase domain | 10 | 227 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Mibi08g2112 | 425 | FunFam | Casein kinase I isoform delta-like | 1 | 339 | - | - | |
| Mibi08g2112 | 425 | MobiDBLite | consensus disorder prediction | 303 | 328 | - | - | |
| Mibi08g2112 | 425 | ProSitePatterns | Protein kinases ATP-binding region signature. | 15 | 38 | IPR017441 | GO:0005524 | |
| Mibi08g2112 | 425 | PANTHER | CASEIN KINASE-RELATED | 13 | 312 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi08g2112 | Mibi-ChrMibi08 | 38566732 | 38571585 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi08g2112 | 8 | 213 | EF-hand Containing Proteins | AT2G17890 | 29.302 | 2.34e-15 | 76.3 |
Transcription factors information