Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2100 ATGGAACGTGACAAGACAGCCCCTGCTCCATCAGATGGGCTCAGCGACGGTGCTCAGAAAATTAGAGCCCTGCATGGGCGGACTAGTGGCCCTACCAGGCGTTCTACAAAAGGACAGTGGACTCCTGAAGAGGATGAGATCTTGCGGAAGGCAGTTCAACGTTTTAAAGGAAAGAATTGGAAGAAAATAGCGGAGTGCTTCAAGGATAGAACAGATGTACAATGTCTACATAGATGGCAGAAAGTCTTAAACCCTGAACTGGTCAAAGGTCCATGGTCTAAAGAGGAAGATGAAATAATAATTGATTTGGTGAACAAATATGGCCCAAAAAAATGGTCTACTATCGCACAACACTTACCTGGACGAATTGGTAAGCAATGCCGAGAAAGGTGGCATAATCATCTCAATCCCGGTATAAACAAAGAAGCATGGACCCAAGAAGAGGAGTTGGCTCTAATACGTGCACATCAAATGTATGGGAACAGATGGGCCGAATTGACGAAGTTTTTGCCTGGAAGGACGGACAATGCTATAAAAAATCACTGGAACAGTTCTGTCAAAAAGAAATTGGATTCTTACTTGGCATCGGGTTTGCTTATACCTCATGTTGGACGTCCAAATCAACCCATGGTTTCTACATCTTCGAGGATACCTTGTAGCGGTGATGATAGTGGTCTGAAGGGAATCGGAGAGGAAGTTTCAGAGTGTAGCCAAGAGTCTGCTAGTGCTGGTCGTCTACCAGTTTCCCGAGAAATGACAAGGGTTTCACAGGCTAGAGAAGAAACCAAGCCAAATGAATATTCTGGTCTAGGAAAGGAGCAAAGTCCTAGTCAAGCATCATGTTCAGAGCCATATTATATACCATTGGATGATGTTACCATATCCAACTCAGACATTGCTCGTGAAGAGGCTTCCTCTTCTCGATTCACTGAGCAAAATTACTCACATGAGCCTGGAAATTCTGCCAGCATGGACAATGGATTCCAATTACATGGTTTACATGGTATTTCATCCTTAGACTTGGGTCAGGACTTCTCACTTTTGCAGGGAGATTGTATAGTTTCTAATGAAAACCATGACATTATGGATGCTCAATTTCATACTTCAGTGGGGTTAGGTATTGCAACATCTATGAATTCTTCTAAACAAGAGGGCATGTTGATAGCTGATGAAGAATGTTGTAGATTTCTGTTTTCAAATGCAATGGATAACAGAACCCTTTCATCTGGAGATCATAACGAAGGTGTTGATATGGTTTTGCCTGCATGCACTTCAAATCTTTTCCAATCATCTGAGATCCAGATATCTGATGCTGATCAAACCTCAGCTGCACTCAAAACTTGTCCAACAAGATCTAATAATAATTTAAGGGAATCTTCATGCTGCCAGTCTTTCCCAGCTATTCCTTCATCGCTTTTAGTTAATGATGGTAGATTATTGTACACTGCTGAAGCCGCTCAAATATATGGAGGTGATGATCAGCACTTTGCCTCCAATGCACATGACAGCTTCATTCACCCCAACGACTCATCCATCTCACCTTGCATGGATATCATAGAAAGTGCTGAAATTCACGATGGACCCAATATTGTGAATGATGCATTAAGATTGGTCCCTGTAAATAATTTTACTTGTGCATCAGACACCAAGCAAACTTGTAGTCCAATGGATGAAAAGGCAGATGTGCAAACAGAACAGGAGGACACAGGATCTCTATGTTATGAACCTCCACGATTTCCAAGCTTGGATATTCCTTTCTTTAGCTGTGATCTTATACAAAATGGAGGGGATATGCAGCAAGATTTCAGTCCGCTGGGTATCCGCCGGCTTATGATGTCTTCAGTGAACAGTCCAACTCCCTTGAGGTTGTGGGACTCGCCTTCTCGTGATGAAAGTCCAGATGCTTTGTTAAGAAGTGCTGCAAAAACTTTCACTAGTACACCATCCATTCTAAAGAAGCGGCGTCGGGACTTGTTATCACCATTATCAGATAAGAGAATCGAGAAGAAACTTGAGACTGCCATGACTACACATTTTTCACGCTTGGATGTCATGTTCGATGACAATGAAGCTCAGGCTGCCAATATGCTTCCTCCATCTTCAATACAGAAAAACAAAGATGGAGCTTCTGATGATGATAAAGAAAATCGTGGGCCAGCTTTGAAAGGAGAACATGTAGAGGGTAAAAAGGAACCTACCATTTTGAAGTGCAAAGAGTCAGTGAAAGATACCTGTAATAATAACTCTCAGGACGTTGATTCGAAGATGGGGACTGATGCTGCTGCTGCTGAGATTGGGCAACAATCTTCCGAAGTCTTAACCGAACGTGATTTGAATGAATTGCTATTGTATTCTCCAAATCAAATTCGTTTTAGCGCGGATAGAATTCACATTTCAAACGGTAGAACTCCCAAAATCCTGAACACCAAATGCTTTGAAGCAGCCCCAAATCAGAATATCGGTCCAAAGTCATTTAATGGAAATCCCTACGCAAGTGACTGCTCCCCTTCTGTTCGTGTAAAGGAGCTTGAAATTTCTTCAGTGCGACCATCTCATTGTTCTTCTGTCCCTGTGGAGAATTCTGGTGATCATACTGGGAATGATGCTGGTTTTGAAACATCCAGCATATTTGGTGGAACACCTTTTAGAAGAAGCATTGAATCACCTTCAGCATGGAAGTCCCCTTGGTTTATTAATACTTTTCTGACTAACCCCAGAATTGATACTGAAATAACGATTGAGGATTTTGGGTATTTAATGAGCCCGGGTGATAGAAGCTATGATGCAATTGGGTGGATGAAGCAGGTAAAGGAACAAACTGCAGCTGCATATGCCAACGCCGAGGAGATTCTGGAAATAGACACTCCCAAGGCAAAAGATGCATCTGAAAATGCCAGGGATGGGGACCGGGAAGAGGGAAGAGACCCTCATAATCAACGTGGCAATCATTGTCAGCTAGATTCTTCAAATGGTTTGATGGAGCGACGGGCACTTGACTTTAGTGAATGTGGAACACCAGGAAAGGAGAACAACAAATCTTCAGCTATGACCTTCTCGAGCCCCTCTTCATATTTGTTGAAAGGGTGTAGATAG 3093 0.4261 MERDKTAPAPSDGLSDGAQKIRALHGRTSGPTRRSTKGQWTPEEDEILRKAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIDLVNKYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPGINKEAWTQEEELALIRAHQMYGNRWAELTKFLPGRTDNAIKNHWNSSVKKKLDSYLASGLLIPHVGRPNQPMVSTSSRIPCSGDDSGLKGIGEEVSECSQESASAGRLPVSREMTRVSQAREETKPNEYSGLGKEQSPSQASCSEPYYIPLDDVTISNSDIAREEASSSRFTEQNYSHEPGNSASMDNGFQLHGLHGISSLDLGQDFSLLQGDCIVSNENHDIMDAQFHTSVGLGIATSMNSSKQEGMLIADEECCRFLFSNAMDNRTLSSGDHNEGVDMVLPACTSNLFQSSEIQISDADQTSAALKTCPTRSNNNLRESSCCQSFPAIPSSLLVNDGRLLYTAEAAQIYGGDDQHFASNAHDSFIHPNDSSISPCMDIIESAEIHDGPNIVNDALRLVPVNNFTCASDTKQTCSPMDEKADVQTEQEDTGSLCYEPPRFPSLDIPFFSCDLIQNGGDMQQDFSPLGIRRLMMSSVNSPTPLRLWDSPSRDESPDALLRSAAKTFTSTPSILKKRRRDLLSPLSDKRIEKKLETAMTTHFSRLDVMFDDNEAQAANMLPPSSIQKNKDGASDDDKENRGPALKGEHVEGKKEPTILKCKESVKDTCNNNSQDVDSKMGTDAAAAEIGQQSSEVLTERDLNELLLYSPNQIRFSADRIHISNGRTPKILNTKCFEAAPNQNIGPKSFNGNPYASDCSPSVRVKELEISSVRPSHCSSVPVENSGDHTGNDAGFETSSIFGGTPFRRSIESPSAWKSPWFINTFLTNPRIDTEITIEDFGYLMSPGDRSYDAIGWMKQVKEQTAAAYANAEEILEIDTPKAKDASENARDGDREEGRDPHNQRGNHCQLDSSNGLMERRALDFSECGTPGKENNKSSAMTFSSPSSYLLKGCR 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2100 1030 FunFam Transcriptional activator Myb isoform A 36 88 - -
Mibi08g2100 1030 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 190 IPR017930 -
Mibi08g2100 1030 ProSiteProfiles Myb-like domain profile. 32 83 IPR001005 -
Mibi08g2100 1030 ProSiteProfiles Myb-like domain profile. 84 135 IPR001005 -
Mibi08g2100 1030 Gene3D - 36 88 - -
Mibi08g2100 1030 MobiDBLite consensus disorder prediction 268 282 - -
Mibi08g2100 1030 Pfam Myb-like DNA-binding domain 89 135 IPR001005 -
Mibi08g2100 1030 Pfam Myb-like DNA-binding domain 141 183 IPR001005 -
Mibi08g2100 1030 Pfam Myb-like DNA-binding domain 37 83 IPR001005 -
Mibi08g2100 1030 SUPERFAMILY Homeodomain-like 86 182 IPR009057 -
Mibi08g2100 1030 FunFam Transcriptional activator Myb isoform A 89 141 - -
Mibi08g2100 1030 CDD SANT 143 183 IPR001005 -
Mibi08g2100 1030 FunFam Transcription factor MYB3R-2 142 207 - -
Mibi08g2100 1030 Gene3D - 142 197 - -
Mibi08g2100 1030 MobiDBLite consensus disorder prediction 695 728 - -
Mibi08g2100 1030 MobiDBLite consensus disorder prediction 954 1030 - -
Mibi08g2100 1030 MobiDBLite consensus disorder prediction 954 981 - -
Mibi08g2100 1030 PANTHER MYB PROTEIN-RELATED 37 110 - -
Mibi08g2100 1030 CDD SANT 40 83 IPR001005 -
Mibi08g2100 1030 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 139 IPR017930 -
Mibi08g2100 1030 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 83 IPR017930 -
Mibi08g2100 1030 MobiDBLite consensus disorder prediction 706 728 - -
Mibi08g2100 1030 MobiDBLite consensus disorder prediction 235 283 - -
Mibi08g2100 1030 MobiDBLite consensus disorder prediction 1 42 - -
Mibi08g2100 1030 MobiDBLite consensus disorder prediction 1006 1024 - -
Mibi08g2100 1030 Gene3D - 89 140 - -
Mibi08g2100 1030 ProSiteProfiles Myb-like domain profile. 136 186 IPR001005 -
Mibi08g2100 1030 SUPERFAMILY Homeodomain-like 33 89 IPR009057 -
Mibi08g2100 1030 MobiDBLite consensus disorder prediction 300 321 - -
Mibi08g2100 1030 CDD SANT 91 135 IPR001005 -
Mibi08g2100 1030 SMART sant 36 85 IPR001005 -
Mibi08g2100 1030 SMART sant 88 137 IPR001005 -
Mibi08g2100 1030 SMART sant 140 188 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2100 Mibi-ChrMibi08 38426566 38431777 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2100 9 1030 MYB Transcription Factor Family AT4G32730 43.171 0.0 698
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi08g2100 Myb_DNA-binding 3e-15 CL0123