Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2074 ATGAAAGATCAAGACCCTAATTATAAAGCATCAAAAACCCAATTGAACAAGAGTTTTTACTCCATGCAAAAGAAAGAGAAGGAAGCAATAAGTAGGAAAGAAGGGAGGGATAAGGAAATGGAAGGTGGAAGTGGAGGAGTGACAGTAACCAAGGAGGAAACCCTACCTCCAGGGTTTCGATTTCATCCCACAGATGAAGAACTCATCACAAGCTATCTCATCAACAAGATCTCTGATTCTTGTTTCTCTGCTCGAGCCATCACCGACGTCGATCTCAACAAATGCGAGCCATGGGACCTCCCCGGGAAGGCGAAGATGGGAGAGAAAGAGTGGTACTTCTTCAGCCTGAGGGATAGAAAGTATCCGACGGGGGTGAGGACGAACAGGGCTACAAACACAGGCTACTGGAAGACCACAGGGAAGGACAAGGAAATAGTGAACAGTGCAACATCGGAGTTGGTAGGGATGAAGAAGACTTTGGTATTCTACAAAGGAAGAGCCCCAAGAGGTGAGAAATCCAACTGGGTCATGCATGAATATCGTATCCACTCCAAATCCTCCTTCCGTCTCCATAACAAGGATGAATGGGTGGTTTGTAGAGTGTTTCAGAAGAGTGGAGGAGCCAAGAAGTATCCTTCAAATCACACAAGAGGAGTGAATCCATATAGCCTGGAAATAAGCCCTAACATGGTGGGACCTTCAATGATGCATATGGCTGATCCTAATTCTGCTCACTTCCTCTATGGAAGAAATTATGTCAACACTGCTCCTGACCTCACTGAAGTTGCTAGGGTTTTGAGAGCAGCAGGAGGAGGAGGAGTTAACTCAACTACCACTGCTTTCAACTTACCAATGCAAACACATCCTCATCAACTTAACTATCCTGCCGTTGCCGCAGCCGGAGGAGGGTTTACTATTTCCGGCCTCAACTTGAATCTTGCCGGAGGAGCCGCCACTGGGCAACATGTTTTCCGGGCGATGAACCCGCCGCATGATGTGGCTTCCAATAACATGATGACAGCTGGTAGTTCTATGAGTAATGGAGTGGATAATCATGTAGGGTATGGTGCTGCAGAAATGAGTAACGTTAACCCTAATACTAATAATAATAATAATAATAATAATAATAATAATATTGGTCAAAGTAACAACAGGTTCATTGGGATGGACCCTTGTGTGGATTTAGATAACTACTGGCCTCCCTACTAA 1209 0.45 MKDQDPNYKASKTQLNKSFYSMQKKEKEAISRKEGRDKEMEGGSGGVTVTKEETLPPGFRFHPTDEELITSYLINKISDSCFSARAITDVDLNKCEPWDLPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIVNSATSELVGMKKTLVFYKGRAPRGEKSNWVMHEYRIHSKSSFRLHNKDEWVVCRVFQKSGGAKKYPSNHTRGVNPYSLEISPNMVGPSMMHMADPNSAHFLYGRNYVNTAPDLTEVARVLRAAGGGGVNSTTTAFNLPMQTHPHQLNYPAVAAAGGGFTISGLNLNLAGGAATGQHVFRAMNPPHDVASNNMMTAGSSMSNGVDNHVGYGAAEMSNVNPNTNNNNNNNNNNNIGQSNNRFIGMDPCVDLDNYWPPY 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2074 402 SUPERFAMILY NAC domain 51 204 IPR036093 GO:0003677|GO:0006355
Mibi08g2074 402 ProSiteProfiles NAC domain profile. 55 204 IPR003441 GO:0003677|GO:0006355
Mibi08g2074 402 MobiDBLite consensus disorder prediction 1 60 - -
Mibi08g2074 402 Pfam No apical meristem (NAM) protein 56 182 IPR003441 GO:0003677|GO:0006355
Mibi08g2074 402 MobiDBLite consensus disorder prediction 21 41 - -
Mibi08g2074 402 MobiDBLite consensus disorder prediction 363 382 - -
Mibi08g2074 402 Gene3D NAC domain 64 207 IPR036093 GO:0003677|GO:0006355
Mibi08g2074 402 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 52 336 - -
Mibi08g2074 402 FunFam NAC domain-containing protein 100-like 64 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2074 Mibi-ChrMibi08 38014952 38017298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2074 40 402 NAC Transcription Factor Family AT2G24430 47.273 2.70e-102 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi08g2074 NAM 2.2e-40 No_clan