Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2059 ATGGTGCCTTCCATTTTCCATCTTCTTCTTCTTCCATGTATGGCTCACCAAAAACCTAATCATCATGGGCTTCCCCTGCTTATCATGATCACCTTCTTCTTGGTCCCAACCCTTTGCTCTGTTCCATCTCTTGGTGATGACCCACAAGTTCTTATCAATTTCAAGAACTTCTTGTCCAATACATCAGCCTTATCCAACTGGAATAAATCTATCAATATCTGTAACTGGAAAGGAGTAAAATGTCGCAAAGGTGGATTTCACTTGATCCTGGAGAATATGGGACTAAGTGGCACTATAGATATTGACACTTTATTGGAATTCTCCAATTTGCAATCTTTTAGCGTCAAGAATAATGATTTTGAAGGTAACATGCCTATTTTTAATAGGTTTGGGAGATTGAAGGGGCTTTATTTGTCGCACAACAAGTTCTCTGGAGATATTCCTGATAATGCTTTTGAGGGTATGAAGTATCTGAGCAAGGTGTATTTGGATGAAAATGAGTTCACTGGTCGGATTCCTAGTTCTCTTGCTGAATTGCCCAACCTTTTGGATTTGGACTTACATGCGAATCGTTTTGAGGGGAACATACCAGAGTTTAAAACCAAGAATAAGTTCAGAGTTTTTAATGTATCCAATAATAAGCTCGAAGGTGAGATACCAGGAAGTGGAAACCACGGAGATCCAATAGCACATGAAGGAAACAAAAAGTCCTCCTCATCAAGGAAGAGAGACATTCTTATAACTGCTATTATAGTGGTGGCCGTGATCTTCTTGGCTTCAATTATAGCAGCATTATTTGTTCTTCGCCGTCGCCATGGCCGGAGACAGAGAAGACATAGTACTACTAATACTACTAGCAGTAATTCTCCGACGAAAACTGCGGTGGTTAACCAAGTGCAACATCAAACTAGTGAGCCCTTGGTAATTAAGGAGCCTAGTCCACCATCATTTGATATCACAGCTGAATTTAAGAAGGGTGAGGGTGGAGATTTGAATTTTGTTAAGAAAGAAAGGGAGGGATTTGATCTGCACGATCTACTTAGAGCATCGGCTGAAATTTTGGGAAGTGGGAGTTTTGGGTCAACGTATAAGGCTATTGTTTTGAATGGACCAGCCGTGGTGGTGAAGAGATTTAAGCACATGAATAATGTTGGGAAAGAAGAGTTCTTTCAGCATATGAGGAGACTTGGAAGCTTGAACCATCCTAATCTTCTTCCTCTTGTTGCTTTCTACTTCAGAAAAGAAGAGAAGCTTCTCGTTTATGACTTCGTTGAAAATGGCAGCTTGGCCAGCCACCTCCATGGTAGGCGTGGTTCTGGGCTAGATTGGCCAACTCGGTTGAAGATCATAAAAGGAGTAGCGAGAGGATTAGCATACCTGTACAGAGAATTCCCAGATCAAAAGCTACCACACGGACACCTAAAATCCTCCAATGTTCTGTTAGACCAATCAATGGAACCTCGTTTAACAGAGTACGGATTCGTACCAGTGATGAACAAGAACCACGCGCAACAATTCATGGCGGCATACAAGTCCCCAGAAGCAAGCCAATCAGAGAGACTAATCCAAAAGAGCGATGTGTGGTGTTTGGGGATTCTGATTCTTGAACTTCTTACAGGGAGATTCCCAGCAAATTACCTGCGGCATGGGAAAGGGGAGAACTCGGACTTGGCAATGTGGGTGAACTCAGTGGTGAGAGAAGAGTGGACAGGGGAAGTGTTTGATAAGGATATTGTGGGTACGAGGAATGGTGAGGGAGAAATGTTGAAGCTTTTGAAGATTGGGATGTATTGTTGTGAATGGGATGTGGAGAATAGGTGGGATTTGAAGGAGGCTATTGATAAGATTGAGGAATTGAAGGAGAAGGATAGTGAAGATGATTATTTGTCTTCGTTTAATAACAGTGAAGCTGATTTGTCTTCTTCAAGGCCTGTGACTGACGATGACGAGTCTTCCATCACAGCACCCAACTAG 1974 0.4225 MVPSIFHLLLLPCMAHQKPNHHGLPLLIMITFFLVPTLCSVPSLGDDPQVLINFKNFLSNTSALSNWNKSINICNWKGVKCRKGGFHLILENMGLSGTIDIDTLLEFSNLQSFSVKNNDFEGNMPIFNRFGRLKGLYLSHNKFSGDIPDNAFEGMKYLSKVYLDENEFTGRIPSSLAELPNLLDLDLHANRFEGNIPEFKTKNKFRVFNVSNNKLEGEIPGSGNHGDPIAHEGNKKSSSSRKRDILITAIIVVAVIFLASIIAALFVLRRRHGRRQRRHSTTNTTSSNSPTKTAVVNQVQHQTSEPLVIKEPSPPSFDITAEFKKGEGGDLNFVKKEREGFDLHDLLRASAEILGSGSFGSTYKAIVLNGPAVVVKRFKHMNNVGKEEFFQHMRRLGSLNHPNLLPLVAFYFRKEEKLLVYDFVENGSLASHLHGRRGSGLDWPTRLKIIKGVARGLAYLYREFPDQKLPHGHLKSSNVLLDQSMEPRLTEYGFVPVMNKNHAQQFMAAYKSPEASQSERLIQKSDVWCLGILILELLTGRFPANYLRHGKGENSDLAMWVNSVVREEWTGEVFDKDIVGTRNGEGEMLKLLKIGMYCCEWDVENRWDLKEAIDKIEELKEKDSEDDYLSSFNNSEADLSSSRPVTDDDESSITAPN 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2059 657 SUPERFAMILY Protein kinase-like (PK-like) 352 616 IPR011009 -
Mibi08g2059 657 Pfam Leucine rich repeat 132 192 IPR001611 GO:0005515
Mibi08g2059 657 Pfam Protein kinase domain 351 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2059 657 SUPERFAMILY L domain-like 67 222 - -
Mibi08g2059 657 FunFam Pollen receptor-like kinase 1 424 630 - -
Mibi08g2059 657 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Mibi08g2059 657 MobiDBLite consensus disorder prediction 623 657 - -
Mibi08g2059 657 MobiDBLite consensus disorder prediction 273 293 - -
Mibi08g2059 657 Gene3D Phosphorylase Kinase; domain 1 318 423 - -
Mibi08g2059 657 Gene3D Ribonuclease Inhibitor 88 225 IPR032675 -
Mibi08g2059 657 Gene3D Ribonuclease Inhibitor 40 87 IPR032675 -
Mibi08g2059 657 ProSiteProfiles Protein kinase domain profile. 348 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2059 657 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 34 624 - -
Mibi08g2059 657 FunFam pollen receptor-like kinase 1 318 423 - -
Mibi08g2059 657 MobiDBLite consensus disorder prediction 630 657 - -
Mibi08g2059 657 MobiDBLite consensus disorder prediction 216 238 - -
Mibi08g2059 657 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 102 196 - -
Mibi08g2059 657 Gene3D Transferase(Phosphotransferase) domain 1 424 639 - -
Mibi08g2059 657 Pfam Leucine rich repeat N-terminal domain 45 81 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2059 Mibi-ChrMibi08 37881594 37885006 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2059 28 648 Receptor kinase-like Gene Family AT4G31250 45.833 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi08g2059 Pkinase 2.1e-30 CL0016