Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2054 ATGCGTTTAAGTGAGCAACCAGGTTATATATATAGACTAGCTATTTTTTATGGAGAAGGTAAAAGGAATTGGATTGAAGAATCTGTAAAACAGCGGTGTACTTTGAGACCACGAAAGGACTTCTTTATTTGGTATTACTCTAATAGTATTATAAAAGCTATCATTTCCATTTTTGAATTGACAAAGGAAAGACACACACACACACATAGAGGAATGTGGCTGTCGAAGAATCACCCGGAGAAGAAGGATGGAGTTCAGGGGATAGTGGCAGTGGCAATAGACAGAGACAAAGGAAGCCAAAATGCACTCAAATGGGCCATTGATCATCTTCTTGTACGAGGATCCACCGTTGTTCTTATCCATGTCAAGGTTAAGTCATCCACATTGTCTTCATCGCCTTCTCCAAGGTCTAATGGTTCTGATGAGAGTTCTCTAATATGCAAAGATCCTGATCCTCAAACCAGAGAAATTTTCCTGCCATATCGGGTCTTTTGTACCCGGAAAGATATACAATGTAAGGACATAATACTGGAAGACACGGATGTAGCGAAAGCTTTGATCGAATATTCTTCACATGCAGCAATTGAACATTTGGTTATTGGTGCGTCAACCAAAACTGGTCTGCTTAGAAGATTCAAGACAGCAGATATTCCAGGAGCTGTAGCAAAAGGGGCACCAGATTTTTGTAACGTGTATGCTGTGGCTAAAGGTAAAATCCATTCAATGAGATCATCTACTCGTCCTGCTCCTGCAATGTCTCCTCTACGAAGCCAGCTTACTCAATCAAGCACCAAAACTGAGCACTCAGATCCTGGACCTGGACTAGGAATACCTCCAACTAATAATAATATGAGAGAAATACGTTTGAAACCAGGACGTGATAGGCGAAGCCTTGATGGACCATATAATGTGCTGGATGAATCAGAACCCTTTAGGTCACCGTTCACTAGGAGAGGTTTGAATGGGAAGCCGTATGGAAATCTCTCAGCACCAGATACTGACATATCATTTGTGAGTACTGGTGGAGCTGGAAGGTCAAGTACAGATAGAATGTTTCCTTCAATGTTTGATACCCCAGATTCTGGATTCTCCCATCCACGTCTATCTTATAGCTCAGAACCAGAATTCGAGTCAGCCTCACAGTATGGAAGAAGGTCTGTGGATATGGTCAGCCCTCCTCCTGAATTCTCATCAAACTCACAAGATAGTGACAGACTTTCTTCTTCATCAGGCATGGATGATGTGGAGGCTGAAATGAGGAGACTGAAGTTGGAGCTCAAGCAAACAATGGAAATGTACAGCACAGCTTGTAAAGAAGCTCTCTCGGCAAAGCAGAAGGCTGTAGAACTTCAGAGATGGAAGTTAGAGGAAGAGAGAAGATTAGAAGAGGCGAGGCTAGCAGAGGAAGCTGCATTGGCAATTGCAGAGAAGGAGAAGGCCAAATCCAAAGCAGCTCTTGAAGCTGCTGAGGCACAAAAGAGAATAGCTGAACTGGAAGCACAAAAGAGACTCAATGCAGAAATGAAAGCACTCAGAGAATCAGAAGAGAAGAAGAAAGCACTAGATGCTTTGGTAAATATAGATGTCAGGTATAGAAAGTATTCCATTGAGGACATTGAAGCTGCAACTCAGTTCTTCCAAGAATCACAGAAAATTGGAGAAGGTGGTTATGGTCCTGTCTACCAATGCTATCTGGACCATACACCTGTTGCAGTTAAGGTTCTACGCCCTGATGCAGCTCAAGGAAGATCACAGTTTCAACGAGAGGTTGAGGTACTGAGTTGCATAAGGCATCCAAACATGGTACTCCTCCTAGGAGCCTGTCCAGAATATGGATGTCTTGTGTATGAATTCATGGCTAATGGAAGCTTGGATGATCGTCTGTTTCGCCGAGGAAACACACCACCGCTTCCTTGGCAGCTAAGGTTCAAAATTGCAGCTGAAATAGGCACTGGCTTATTGTTCCTTCACCAGACAAAACCAGAGCCCCTGGTTCACAGGGACTTAAAACCAGCCAACATCTTACTTGACAGAAACTTCGTAGCTAAGATCAGCGACGTAGGATTGGCCAGGCTGGTCCCACCATCAGTGGCAGACAATGTCACACAATACCGTATGACATCCACTGCTGGAACATTCTGTTACATAGACCCAGAATATCAGCAATCAGGAATGTTGGGTGTAAAATCAGACATATATTCCCTTGGAATCATCATATTGCAGATAATAACAGCAAGACCACCAATGGGTTTGACTCATCATGTTGAAAGAGCCATTGAAAAGGGAATATTTAAGGAGATGTTGGATCCAACTGTGCCTGATTGGCCAGAAGGTGAGGCATTGAGTCTTGCCAAGTTGGCTCTAAAATGTGCTGAGTTAAGGAGGAAGGATAGGCCTGATCTGGGCAAAGAGATATTACCAGAACTTAACAGATTGAGAATGCTTGCTGAAAGCGCTGATCACCATTCAATTTTGAGTGGCTATTTAAGCCCTCCTAATCTGAGCCTAGTTTCAGCGCCTGCGGTATGTTTTTTTCTCTCATTCTCTTCAACTTCTTCTTCCTTTTTTTTTCCAGTGCCAAAAGAAAAAAAAATAATCAGTATTGGCAATTTATGTATTCACAATGCGTTGTTGTTGTTGGTTATGGATGGCCAGGTGCATGATCAAATCGTTTCCAAAGTTCACACTGGGGAGGGCGCAAGAAATAGATCAAGTCCTGCTTGA 2724 0.4295 MRLSEQPGYIYRLAIFYGEGKRNWIEESVKQRCTLRPRKDFFIWYYSNSIIKAIISIFELTKERHTHTHRGMWLSKNHPEKKDGVQGIVAVAIDRDKGSQNALKWAIDHLLVRGSTVVLIHVKVKSSTLSSSPSPRSNGSDESSLICKDPDPQTREIFLPYRVFCTRKDIQCKDIILEDTDVAKALIEYSSHAAIEHLVIGASTKTGLLRRFKTADIPGAVAKGAPDFCNVYAVAKGKIHSMRSSTRPAPAMSPLRSQLTQSSTKTEHSDPGPGLGIPPTNNNMREIRLKPGRDRRSLDGPYNVLDESEPFRSPFTRRGLNGKPYGNLSAPDTDISFVSTGGAGRSSTDRMFPSMFDTPDSGFSHPRLSYSSEPEFESASQYGRRSVDMVSPPPEFSSNSQDSDRLSSSSGMDDVEAEMRRLKLELKQTMEMYSTACKEALSAKQKAVELQRWKLEEERRLEEARLAEEAALAIAEKEKAKSKAALEAAEAQKRIAELEAQKRLNAEMKALRESEEKKKALDALVNIDVRYRKYSIEDIEAATQFFQESQKIGEGGYGPVYQCYLDHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEFMANGSLDDRLFRRGNTPPLPWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNFVAKISDVGLARLVPPSVADNVTQYRMTSTAGTFCYIDPEYQQSGMLGVKSDIYSLGIIILQIITARPPMGLTHHVERAIEKGIFKEMLDPTVPDWPEGEALSLAKLALKCAELRRKDRPDLGKEILPELNRLRMLAESADHHSILSGYLSPPNLSLVSAPAVCFFLSFSSTSSSFFFPVPKEKKIISIGNLCIHNALLLLVMDGQVHDQIVSKVHTGEGARNRSSPA 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2054 907 CDD STKc_IRAK 552 812 - -
Mibi08g2054 907 Coils Coil 412 432 - -
Mibi08g2054 907 MobiDBLite consensus disorder prediction 246 269 - -
Mibi08g2054 907 PANTHER OS02G0152300 PROTEIN 89 824 - -
Mibi08g2054 907 SMART serkin_6 546 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2054 907 Gene3D Transferase(Phosphotransferase) domain 1 619 825 - -
Mibi08g2054 907 MobiDBLite consensus disorder prediction 392 408 - -
Mibi08g2054 907 CDD STK_N 88 237 - -
Mibi08g2054 907 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 89 212 - -
Mibi08g2054 907 ProSiteProfiles Protein kinase domain profile. 546 825 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2054 907 SUPERFAMILY Protein kinase-like (PK-like) 529 801 IPR011009 -
Mibi08g2054 907 MobiDBLite consensus disorder prediction 128 144 - -
Mibi08g2054 907 MobiDBLite consensus disorder prediction 243 327 - -
Mibi08g2054 907 Pfam Universal stress protein family 89 212 IPR006016 -
Mibi08g2054 907 MobiDBLite consensus disorder prediction 128 149 - -
Mibi08g2054 907 MobiDBLite consensus disorder prediction 356 414 - -
Mibi08g2054 907 Pfam Protein kinase domain 546 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi08g2054 907 MobiDBLite consensus disorder prediction 364 379 - -
Mibi08g2054 907 ProSitePatterns Serine/Threonine protein kinases active-site signature. 664 676 IPR008271 GO:0004672|GO:0006468
Mibi08g2054 907 Gene3D Phosphorylase Kinase; domain 1 525 618 - -
Mibi08g2054 907 FunFam U-box domain-containing protein 51 619 819 - -
Mibi08g2054 907 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 518 618 - -
Mibi08g2054 907 MobiDBLite consensus disorder prediction 287 302 - -
Mibi08g2054 907 Gene3D HUPs 88 231 IPR014729 -
Mibi08g2054 907 Coils Coil 438 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2054 Mibi-ChrMibi08 37851154 37856645 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2054 72 840 Receptor kinase-like Gene Family AT1G78940 56.633 0.0 799
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mibi08g2054 Pkinase 7.4e-41 CL0016