Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2047 ATGAGGAAAAACCCCCAAATTCCTTTTCTCTCTCATCTACCCGGTCATCCGGTCACCTCCATCCCCATATATCTCCCTCTTCCCCCTCCATTAACCTTTACTCTTTCTTCTTTAACCTATCTCTGCAACTCCCATGGCGGCTTGAATTTCAACCCCTTGGATTTCCCACTCTTCCTCTCACGAATCACTCAAATGGCGGTGGAGCTCATGGGGTTCCCGAAAATGGACGAACAGAGAGCAATTCAGGAGGCTGCATCTGAGGGATTAAAGGGTATGGAGAATCTAATCCGTCAACTATCTCACAAGCCCAATCTCATGGATTGCTCAGATCTCACCGATGTTACTGTTTCTAAGTTCAAGAAACTCATCTCTCTCCTAAATCGAACCGGCCATGCCCGGTTCAGAAGAGCTCCGATTCCATCATCTTCCAGCTCTCCTCCCCCTTCTACTTCGAATTTTCCGCCATCGGCTGCCAACATTTCCCAATCTCAGATTCCGAATCCATTGCCGGCGCCGATTGTGAATCCGATGACCGTACATCAAGCTCCGATCAACAACAACAACACATCTTCCTCTGGTTTTGTTCCGGGTCATTCACAGTCGCTGACTCTCGATTTCACGAAACCTAATTTATTGAGCTCTGGTACGAAGTCCTTAGAGCTGGAGTTCTCCAAAGAAACCTTCAGCGTCTCTTCGAACTCGTCTTTCATGTCGTCGGCCATCACCGGCGACGGTAGCGTATCGAATGGTAAGCAAGGATCGTCGATCTTTCTCACACCGCCGGTGCCGACGGTCTCCGGCAACGGAAAGCCGCCGCTCTCGACGGCGCCGACCAAGAAGAGATGCCACGACCACCGTGAGCATTCCGATGATGTCTCCGGCTCCAGCAAGTGCCACTGCACAAAAAGAAGGAAGAATCGTATGAAGAAGGTGGTGAGAGTGCCGGCGATTAGTCCAAAGATCGCCGATATTCCCCCGGACGAGTATTCATGGAGGAAGTACGGTCAGAAGCCGATCAAGGGATCACCGTATCCAAGGGGTTACTACAAGTGTAGTACAGTGAGAGGGTGCCCGGCGAGGAAACACGTGGAGCGGGCCCTGGATGATCCGACGATGCTGATTGTAACTTATGAGGGGGAGCACCGTCACGCATTTGAGGCCTCGATGCAGGAGAACGCCGCCGGCGTTGTTGGGTTGGTTTTTCAGTCAACGTGA 1215 0.516 MRKNPQIPFLSHLPGHPVTSIPIYLPLPPPLTFTLSSLTYLCNSHGGLNFNPLDFPLFLSRITQMAVELMGFPKMDEQRAIQEAASEGLKGMENLIRQLSHKPNLMDCSDLTDVTVSKFKKLISLLNRTGHARFRRAPIPSSSSSPPPSTSNFPPSAANISQSQIPNPLPAPIVNPMTVHQAPINNNNTSSSGFVPGHSQSLTLDFTKPNLLSSGTKSLELEFSKETFSVSSNSSFMSSAITGDGSVSNGKQGSSIFLTPPVPTVSGNGKPPLSTAPTKKRCHDHREHSDDVSGSSKCHCTKRRKNRMKKVVRVPAISPKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERALDDPTMLIVTYEGEHRHAFEASMQENAAGVVGLVFQST 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2047 404 SUPERFAMILY WRKY DNA-binding domain 323 384 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi08g2047 404 Pfam WRKY DNA -binding domain 327 383 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi08g2047 404 SMART WRKY_cls 325 385 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi08g2047 404 MobiDBLite consensus disorder prediction 134 196 - -
Mibi08g2047 404 FunFam WRKY transcription factor 65 309 386 - -
Mibi08g2047 404 ProSiteProfiles WRKY domain profile. 320 386 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi08g2047 404 MobiDBLite consensus disorder prediction 179 196 - -
Mibi08g2047 404 MobiDBLite consensus disorder prediction 154 168 - -
Mibi08g2047 404 MobiDBLite consensus disorder prediction 245 273 - -
Mibi08g2047 404 MobiDBLite consensus disorder prediction 245 300 - -
Mibi08g2047 404 Pfam Plant zinc cluster domain 279 323 IPR018872 -
Mibi08g2047 404 Gene3D WRKY domain 304 378 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi08g2047 404 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 78 391 IPR044810 GO:0003700
Mibi08g2047 404 MobiDBLite consensus disorder prediction 277 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2047 Mibi-ChrMibi08 37737413 37739473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2047 65 403 WRKY Transcription Factor Family AT2G24570 60.745 1.45e-119 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi08g2047 WRKY 2.3e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2047 08 37737413 37739473 Mibi08g2047 08 37737413 37739473 ECH