Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2015 ATGATCATCAAAATTACATTCCTTATTGCATTGGTAGTATACTCTGCATGGGCATCTCCATTCGAGCTGGCTTTCACAGAAGTGTTTGTTGGGTCGTTGTGGCCAGTTGATCTACTCATCGATGCCTTCTTCGCCATTGATATAGTCCTAACTTTCTTTGTGGCTTACATAGACAAATCAACCTATCTCCTCGTTGATGACCACAAGAAGATCGCCATCAGGTACGCGAGAAAGTTATATTTTCCCATGGACGTGGCAGCAACTCTGCCATTTGTGCAGATATACCAAATCCAAAAGGGCAGACCGTATGAAGGCGAGGTTTTTGGTTTCCTAAGTATTCTCAGGCTTTGGCGATTAAGGCGTGTTAGCCAACTTTTTGCAAGTTTTCGTTGTTTTATCCACAGATACACGTATTCCATATATTGGGCTGTGGTCACTCTTACTACTGTAGGCTATGGAGATTTTTGTGCTGTGAATGTGGGCGAGAAAATCTTCACTATGTTATATATGCTATTTAACATTGGCTTCAGTGCATATATAATCGGAAACATAACAACTCTGGTTGTACATGGCACTGCCAGAACTAATGCCATGAGAGATGCCATCAATCAAGCACGAAAATATGCAAGCAAAAGTAGACTCCCAGAAAACTTGACAGAGCAAATGCTAGCACACATTCAATTGAAGTTCAAAACAGAAGAGGTACAGCAAGAAAAAGTGCTACAGGACCTGCCAAGGGCTATTAGATCAAATATTGCTCAGCATATTTTCCGTGACATAGTTGAAAGTGCATATTTATTTAAAGGAGTCTCTGATCATTTTATCACCCAACTGGTGTCAGAACTCAAAGCAGAATATTACCCACCTAAGGTTGACATCATCTTGCAAAACGAGATGCCATCATATTTCTATGTTTTGGTATCTGGAGCCGTGGATGTATTAATCAATGAGAATGGAACTGAACAGCTACTGTTGAAGCTAGGATATGAAGGGATGGCAGGAGAAATAGGAGTCATGTTTAATATCCCTCAACCTTTCACGTACTTGAGGGGCTTAAAAAAGTCGGTGGCAGACCAAATTCCTTATCTGACAGAATTGTTGAGTAACTTTCATGTTGAGCAAGTAACACAAGAACCATGCATAAATGGTGAAGGTTCAAATTATCATGAAGATGAACCATATGAACAAGGAAAGAGAGGAAATTCTGATCCATGGTCTAACCTACCAAGAGTGAAAATTCATGGACATCATCCTAAAGAGAACAGAATGGAAAATCAAACCCCACAAAAACTCATACTTCTCCCGAAAACAATGGAAGAACTTTTCAAACTAGCAGCGAAGAAGTTTGGGAAAAGAGGAAGCAAGATTCTTATGGCTGATGGCTCAGAAGTAGAAGAATTAAGCGTCTTAAGAGATAACGACGAGTTGTATATCTTCTAA 1440 0.3993 MIIKITFLIALVVYSAWASPFELAFTEVFVGSLWPVDLLIDAFFAIDIVLTFFVAYIDKSTYLLVDDHKKIAIRYARKLYFPMDVAATLPFVQIYQIQKGRPYEGEVFGFLSILRLWRLRRVSQLFASFRCFIHRYTYSIYWAVVTLTTVGYGDFCAVNVGEKIFTMLYMLFNIGFSAYIIGNITTLVVHGTARTNAMRDAINQARKYASKSRLPENLTEQMLAHIQLKFKTEEVQQEKVLQDLPRAIRSNIAQHIFRDIVESAYLFKGVSDHFITQLVSELKAEYYPPKVDIILQNEMPSYFYVLVSGAVDVLINENGTEQLLLKLGYEGMAGEIGVMFNIPQPFTYLRGLKKSVADQIPYLTELLSNFHVEQVTQEPCINGEGSNYHEDEPYEQGKRGNSDPWSNLPRVKIHGHHPKENRMENQTPQKLILLPKTMEELFKLAAKKFGKRGSKILMADGSEVEELSVLRDNDELYIF 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2015 479 Gene3D - 134 189 - -
Mibi08g2015 479 Gene3D - 2 133 - -
Mibi08g2015 479 Pfam Ion transport protein 7 129 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mibi08g2015 479 MobiDBLite consensus disorder prediction 381 424 - -
Mibi08g2015 479 SUPERFAMILY Voltage-gated potassium channels 6 188 - -
Mibi08g2015 479 Pfam KHA, dimerisation domain of potassium ion channel 409 478 IPR021789 -
Mibi08g2015 479 ProSiteProfiles KHA domain profile. 410 479 IPR021789 -
Mibi08g2015 479 CDD CAP_ED 266 347 IPR000595 -
Mibi08g2015 479 SUPERFAMILY cAMP-binding domain-like 193 348 IPR018490 -
Mibi08g2015 479 SMART cnmp_10 266 384 IPR000595 -
Mibi08g2015 479 FunFam Potassium channel KAT2 254 352 - -
Mibi08g2015 479 PANTHER POTASSIUM CHANNEL AKT1 406 478 IPR045319 GO:0005249|GO:0006813
Mibi08g2015 479 Pfam Ion channel 135 188 IPR013099 -
Mibi08g2015 479 Gene3D Jelly Rolls 252 350 IPR014710 -
Mibi08g2015 479 Gene3D Helix hairpin bin 191 251 - -
Mibi08g2015 479 ProSiteProfiles cAMP/cGMP binding motif profile. 266 347 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2015 Mibi-ChrMibi08 37390782 37398873 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2015 7 479 Ion Channels AT4G32650 46.274 2.41e-155 455