Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1996 ATGGCACATCATAACAATGTCAATCATCACACTTCAGTGAAGCCACTCTTTCATGACTTTATGGGCATGAAGCCCTCTGATTCGCCCCGCGTTTTGGCCACCGGAACAAGCCCCTCGAAGGCGTCGCCGTCGCCTTCGGCCTCTTCCGGTGTCTCCCGTGGGCCCCTCTCAACCATCTCTGATATCGCTTCTGAAAGACAGTTAGGAAATCACCTCGAGGGAGTCCCATTCTATTGTCCAAGGAGTGATCTGTCTGGCACTGAGATTAGTAACAGAATAATAGGATACAAGAGAAGTAATTCTGATTCCAGTTTTATGGGTTCCTCCAGAGATGCATTCCAAATGGTTCCTGACTCTCTTCAAAATTTCCATTTAATGAAGATCCTCCAGAATGCAGCTGGAGGACAGCAACATAGAAGGTCTAATGATGATAATGTGTTTCTTGGTATGCAGTCACGGAAGCCAACTTCTGCTTCTCACATATATCAGCCTTCCATGGGCACTAAGACTGATGTCAATAAATGGGAGCGATCTATTCTCATGAATGCTGGCTCTTCCATACAACATCCACCACATGGGGGTCAATTAGCATCTTTTGTGCACCAGATATCTTCTAACAAGAGCAGGGATGCTATTGCTGGTCCTTCATTTATTTCTCAATCTGCTGCTGATGAAGGATCTAGAACAGGAATCAAGGGCCCTGGGATCTTGAGTTCTATGAACACTACCACTGCTGCCCATGAGAAATCCCTGTCTGCACTTGGCGGAAGCAGGCCAAAGCCATCGACTGGTATAATAGACCCAGAATCTTCCATGCCTCCAAGTCAACAAGGGTTAGCATCTGCCAGCTGCCAGATGACTATTTTTTATGGAGGTCAAGCTCATGTTTTCGATAACGTCCTCCCCAATAAGGCAGAAATTATAATGGCTTTAGCTGGGTCAAATGGTGGCTGTTGGTCCACAACATACTCCCCAAAACCTACTGCGAAGCTCACAAATGACAGTAACATGCTGTGTGGGGATAGTGAGACTGGTATAGTGAGTAAGATTACACCCCCATTGCCACATGAGCCTCATGGAAGATTATCTTTCGCGGGCTCTTCTAGTCTTGCCATCAAATCTGGCAATCGATTGTCTACTCAAACAGGGGCACATCAGGGAAGTTTTGTAGCCAATGAAGATGTTAGGAGTTCAATTAAAGCATCAGATCCCGGTTCTGAGGACAAAAGGACGCAATCACATTGA 1245 0.461 MAHHNNVNHHTSVKPLFHDFMGMKPSDSPRVLATGTSPSKASPSPSASSGVSRGPLSTISDIASERQLGNHLEGVPFYCPRSDLSGTEISNRIIGYKRSNSDSSFMGSSRDAFQMVPDSLQNFHLMKILQNAAGGQQHRRSNDDNVFLGMQSRKPTSASHIYQPSMGTKTDVNKWERSILMNAGSSIQHPPHGGQLASFVHQISSNKSRDAIAGPSFISQSAADEGSRTGIKGPGILSSMNTTTAAHEKSLSALGGSRPKPSTGIIDPESSMPPSQQGLASASCQMTIFYGGQAHVFDNVLPNKAEIIMALAGSNGGCWSTTYSPKPTAKLTNDSNMLCGDSETGIVSKITPPLPHEPHGRLSFAGSSSLAIKSGNRLSTQTGAHQGSFVANEDVRSSIKASDPGSEDKRTQSH 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1996 414 MobiDBLite consensus disorder prediction 378 414 - -
Mibi08g1996 414 Pfam tify domain 281 313 IPR010399 -
Mibi08g1996 414 ProSiteProfiles Tify domain profile. 279 314 IPR010399 -
Mibi08g1996 414 MobiDBLite consensus disorder prediction 247 278 - -
Mibi08g1996 414 MobiDBLite consensus disorder prediction 400 414 - -
Mibi08g1996 414 SMART tify_2 279 314 IPR010399 -
Mibi08g1996 414 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 86 349 IPR040390 -
Mibi08g1996 414 MobiDBLite consensus disorder prediction 30 57 - -
Mibi08g1996 414 MobiDBLite consensus disorder prediction 378 395 - -
Mibi08g1996 414 MobiDBLite consensus disorder prediction 27 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1996 Mibi-ChrMibi08 37221441 37225015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1996 1 383 Tify Gene Family AT4G32570 38.329 5.30e-49 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mibi08g1996 tify 1.2e-12 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1996 08 37221441 37225015 Mibi05g0686 05 6481803 6485823 CCT