Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1983 ATGGGTAATTGCCTTCATACGGATTCGATAGCAGAGTTATCCAAGCCTTATGGGGGAAGAACGGATTTGCCTTTTCTTGCACGTAGAGATGATAATAAGTTAATGCATTTGTTGCTGAAGAAGGGCTCAGATCCAAATGAAGTAGATTCCAAGGGAAAGACTTTACTGCATATTGCCGCATCTAGAGGCAACAGACGTGGTGTGGCTCTACTTCTCAAATATGGAGCTGATCCTCAGAAAAAAGGTACACTGAATTTAAATGGGGATATCCCACTAGTAGACGCCAATACAGAAGTGGTGAGAAAACTTCTAAAAGACTATAGTAGAAACCGATCCACAACAGATAATGTCAAGTCCCCCAACAAGCTTTCAGGTAAACCAGCCGCTCAAGATTGCCAATTTCGCAATGCTTCACCCGGGGTCAAGGCCGACGCTCAAGCTAGAACATTAGCCAATCCTTTAGCTGGGACCTTGACACAAGCTATAGGATGTGAGGTCGTGGCTAAAGCTCTAGCCAACCCATCTCCCAATTCTATCTTTGGGATCGTGGCTGAAGCTGAAGCCAAACAATTTGGTCGTTCTTTCTCTGGGCCCGCTTCTGCTAACCGTGTCAAAATAGTTGTGAGCTGTCCATTCCAAGGAGATCATCATGGGAGCCTCATGTTTCTGCCAGACTCCTTTGAGGAACTGATTCAAATAGGTGTGGAGAAGTATGACTTCTTGGCCGGCAAAATTACGAATAGAGAAGGGGTTATAATTGAGGATATTAGTCTTATCAGAGCGGGGGATCATGTCGTTCTGGCACGCGATAGGATAGTTGTGAGCTGTCCACAAAAAGGAGACCATAATGGGAGAGTCGTGTGGATGCCCAAGTCACTTGAGGAATTGATTAACATAGGAGTTGACAAGTACGGCTTTTTGGCCAGTAAAGTAACAACTAAGGAAGGAGTTATAATTGATAACGTCAGTGATATCAAAGATGGGGATCATGTCATTCTTGCACGTGATAGGATAGTTGTGAGCTGTCCACAAAAAAGAGACCATCATGGGAGGCTTGTGTGGTTGCCCGAATCCCTCGAGGACTTGATTAACATGGGAGTGGACAAGTACGGCTTCTTGGCCAGTAAAGTAACAACTAGGGAGGGAGCTAAGATTGAGGATATCAGTCGTATCAAAGATGGAGATCATGTCATTCTGTCTCTTGAGTAA 1209 0.4467 MGNCLHTDSIAELSKPYGGRTDLPFLARRDDNKLMHLLLKKGSDPNEVDSKGKTLLHIAASRGNRRGVALLLKYGADPQKKGTLNLNGDIPLVDANTEVVRKLLKDYSRNRSTTDNVKSPNKLSGKPAAQDCQFRNASPGVKADAQARTLANPLAGTLTQAIGCEVVAKALANPSPNSIFGIVAEAEAKQFGRSFSGPASANRVKIVVSCPFQGDHHGSLMFLPDSFEELIQIGVEKYDFLAGKITNREGVIIEDISLIRAGDHVVLARDRIVVSCPQKGDHNGRVVWMPKSLEELINIGVDKYGFLASKVTTKEGVIIDNVSDIKDGDHVILARDRIVVSCPQKRDHHGRLVWLPESLEDLINMGVDKYGFLASKVTTREGAKIEDISRIKDGDHVILSLE 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1983 402 ProSiteProfiles KHA domain profile. 203 285 IPR021789 -
Mibi08g1983 402 Pfam KHA, dimerisation domain of potassium ion channel 205 267 IPR021789 -
Mibi08g1983 402 Pfam KHA, dimerisation domain of potassium ion channel 337 398 IPR021789 -
Mibi08g1983 402 Pfam KHA, dimerisation domain of potassium ion channel 271 332 IPR021789 -
Mibi08g1983 402 ProSiteProfiles KHA domain profile. 337 402 IPR021789 -
Mibi08g1983 402 SMART ANK_2a 18 47 IPR002110 GO:0005515
Mibi08g1983 402 SMART ANK_2a 51 80 IPR002110 GO:0005515
Mibi08g1983 402 PANTHER POTASSIUM CHANNEL AKT1 26 268 IPR045319 GO:0005249|GO:0006813
Mibi08g1983 402 Pfam Ankyrin repeats (many copies) 27 72 IPR002110 GO:0005515
Mibi08g1983 402 ProSiteProfiles Ankyrin repeat region circular profile. 51 77 - -
Mibi08g1983 402 ProSiteProfiles Ankyrin repeat profile. 18 50 IPR002110 GO:0005515
Mibi08g1983 402 ProSiteProfiles Ankyrin repeat profile. 51 83 IPR002110 GO:0005515
Mibi08g1983 402 SUPERFAMILY Ankyrin repeat 17 105 IPR036770 -
Mibi08g1983 402 MobiDBLite consensus disorder prediction 110 131 - -
Mibi08g1983 402 Gene3D - 6 125 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1983 Mibi-ChrMibi08 37057162 37059072 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1983 304 400 Ion Channels AT2G25600 34.021 1.85e-13 70.5