Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1982 ATGGAGTCTTTTCACAAGACCACCGAGATTCTCGATTCCAGCGACCAAAGTGGCGGCGGCAACAACAGTTCCGGCCCCAACACTCCTAAGAATCCCGATGACGGCGGCGACGGCGGATCCTTTACTTGCAATCTGTGTGCCGGCGGCCTTTTTCACCGGAAGAAGAGAGTCCCGGAAGCTAAAGAACTTAGTGAGGGTGGCAGCAGCAGCGAGCACGTTATTGATTTCTCCCATAACATTCCTCAGACCTCCGAAGTTCTACTGTCACAGGAAGATGATAAAGTCCCGGCGGATGACCAAGCTACTACTGCACACCATCGCAATACCGGCAAGCAGGTTGTTAAAAGTGCTGATGACCAAGCCAGCACTTCTCATTCAAGTGCCCATGGCCAGCCCATTGAGCAAGCTGATCGACCCAGCACTTCTCATTTAGGCGAACCGGCGGAAGCTCCCGATCCCAATACCAACGAGCAAGATGATAGGAGGGAACAACCCAATAATATCTCCTTCCTTCACTATATGTGTTTCGGCGCCGGCGGTGGTGCCACTAATTGCTCATCTAGCTGTTCTATTATCGATCCTTCGAGCCTTCGTTATAGGTGTTGGGAGTTATTCTTGTTGATACCGATATTCTACACCGCGCTGGCCATCCCTTTTGAGCTGACGTTTGTGGAGGAAACTAAGTTTAAGGATATTCTGCTGTATGTTGAGACTGCTATCAGTGCCATATTTTTGATTGATATGGTTATGAGTTTTTTTGTCACCCAAATGGACAAAAAAACTCATCTATGGATTCAGAGTCATCGGGAGATTGCGAGTAGATACATGATATATTTCCTGTATGATATCATTGCTGTCACTACCATCGCTTTTGGGTGGGTTCAACGATATCAACACTACCATCACCATCAGTATATTTGGTTCTTCATGATCATCCGTCTTGTTCCAATTTTGCGTCTTTGGAGGGCGGGAGCCATATTTCGCAGATGGGAAAAGAGGAGGATATTAGACTATATCTGGATCCGAGGATTGAAGCTGGCGTGGGTCATGGAGATGAAGGCAGAGTACTTTCCCCCCAATATAGACGTGATTGCACGGAACGAAGCGCCAACAGACTTTTATATATTGGTTACGGGAGCAGTGGACCGCATAGCCACACATAATGGTATGGAAGATGTTAGTGTGGTAAGGAGGGGAGAGGTATTCGGGGAGATAGGTGTTCTGTGTCACACACTGCAACCCTTTATATTTCGCACCAAACAATTGTGCTACCTATTACGCCTCAGTTGCACCACACTTGAAACTCTTGCTCCTTTAAATGTAAAAGATGCGAGAATGCTCATGGATAATTTCCTCCAGCGTTGGGTCCCCTCGAACGATCCAACAGTTAGGAGTGTTTTGGAAGAAAAGAGGAACTCACTTGCTAGGAGTACGAAGCTGCCTGCAGATCTGACTGCCGATCATTTGTTGCGTCAGTTTTTGAGGAGGGCCTCATATATATATGAAAATCTAGCGGGAAAATCCATAGTTGTGAGCTGTCCACAAAGAGGAGACAGTGATGGGAGAGTCTTCCGTCTTCCTGATTCCTATGAGGGTCTTATTAACCTGGGAAGAAACTGGCCAAACTTCACTGCCACCAAAATTATGACTAAAGAGAGAGCTTTGATAGATGATATTGGTGTTATCCAAGAACGGCAACATATCATTCTTGCCAGTGACAATGATTTTCAGCCATAG 1737 0.4646 MESFHKTTEILDSSDQSGGGNNSSGPNTPKNPDDGGDGGSFTCNLCAGGLFHRKKRVPEAKELSEGGSSSEHVIDFSHNIPQTSEVLLSQEDDKVPADDQATTAHHRNTGKQVVKSADDQASTSHSSAHGQPIEQADRPSTSHLGEPAEAPDPNTNEQDDRREQPNNISFLHYMCFGAGGGATNCSSSCSIIDPSSLRYRCWELFLLIPIFYTALAIPFELTFVEETKFKDILLYVETAISAIFLIDMVMSFFVTQMDKKTHLWIQSHREIASRYMIYFLYDIIAVTTIAFGWVQRYQHYHHHQYIWFFMIIRLVPILRLWRAGAIFRRWEKRRILDYIWIRGLKLAWVMEMKAEYFPPNIDVIARNEAPTDFYILVTGAVDRIATHNGMEDVSVVRRGEVFGEIGVLCHTLQPFIFRTKQLCYLLRLSCTTLETLAPLNVKDARMLMDNFLQRWVPSNDPTVRSVLEEKRNSLARSTKLPADLTADHLLRQFLRRASYIYENLAGKSIVVSCPQRGDSDGRVFRLPDSYEGLINLGRNWPNFTATKIMTKERALIDDIGVIQERQHIILASDNDFQP 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1982 578 MobiDBLite consensus disorder prediction 10 30 - -
Mibi08g1982 578 MobiDBLite consensus disorder prediction 106 138 - -
Mibi08g1982 578 SUPERFAMILY Voltage-gated potassium channels 193 349 - -
Mibi08g1982 578 MobiDBLite consensus disorder prediction 87 162 - -
Mibi08g1982 578 SMART cnmp_10 336 452 IPR000595 -
Mibi08g1982 578 Pfam Cyclic nucleotide-binding domain 356 434 IPR000595 -
Mibi08g1982 578 MobiDBLite consensus disorder prediction 1 42 - -
Mibi08g1982 578 Gene3D - 199 347 - -
Mibi08g1982 578 Gene3D Jelly Rolls 348 456 IPR014710 -
Mibi08g1982 578 MobiDBLite consensus disorder prediction 91 105 - -
Mibi08g1982 578 Pfam Ion transport protein 200 345 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mibi08g1982 578 SUPERFAMILY cAMP-binding domain-like 346 454 IPR018490 -
Mibi08g1982 578 ProSiteProfiles KHA domain profile. 508 578 IPR021789 -
Mibi08g1982 578 ProSiteProfiles cAMP/cGMP binding motif profile. 352 454 IPR000595 -
Mibi08g1982 578 PANTHER POTASSIUM CHANNEL AKT1 349 477 IPR045319 GO:0005249|GO:0006813
Mibi08g1982 578 Pfam KHA, dimerisation domain of potassium ion channel 509 569 IPR021789 -
Mibi08g1982 578 CDD CAP_ED 346 448 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1982 Mibi-ChrMibi08 36989560 36993869 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1982 509 573 Ion Channels AT2G25600 38.462 5.90e-09 57.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1982 08 36989560 36993869 Mibi08g1982 08 36989560 36993869 ECH