Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1980 ATGCCTCAACTTTTGAAGGACTCAGAGGAAAGAAAGGATTTGCTTTATGCTGTTGATAGTGATGATAATAAGTTAATGCGTCAGTTGCTGAAGAGGGGCTCAGATCCAAATAAAGTATATTATTCTAATGGATGGACTCCACTGGTTAGGAGATTTGTTTCTTTCTCCTCCATGACTACTGCATTAGCGTATATGGATAAGAATGGACACACCCCGTTATTTGAAGCACAGAGTAGAGGATTTAAATCGGTGGTAAAAATTCTAAAAGACCATAATAGAGACCCATCCACAACAAATAATGTCAAGTCCCCCAACAAGCTTTCAGGTAAACCAGCCGCTCAAAGTTGCCAATTTCTCAATGCTTCACCCGGGATCAAGGCCGACGCTCAAGCTAGAACATTAGCCAATCCTTTGGCTGGGACCTTGACACACGCTATAGGATGTGAGGTCGTGGCTAAAGCTCTAGCCAACCCATCTCCCAATTCTATCTTTGGGATCGTGGCTAAGGCTGAAGCCAAACAATTTGGTCGTTCTTTCTCTGGGCCCGCTTCTGCTAACCGTGTCAAAATAGTTGTGAGCTGTCCATTCCAAGGAGATCATCATGGGAGCCTCATGTTTCTGCCAGACTCCATTGAGGAACTGATTCAAATTGGTGTGGAGAAGATAGTTGTGAGCTGCCCACAAAAAGGAGACCATAATGGGAGAGTCGTGTGGATGCCCAAGTCACTTGAGGAATTGATTAACATAGGAGTTGACAAGTACGGCTTTTTGGCCAGTAAAGTAACAACTAAGGAAGGAGTTATAATTGATAACGTCAGTGATATCAGAGATGGGGATCATGTCATTCTTGCACGTGATAGGATAGTTGTGAGCTGTCCACAAAAAAGAGACCATCATGGGAGGCTTGTGTGGTTGCCCGAATCCCTCGAGGACTTGATTAACATGGGAGTGGACAAGTACGGCTTCTTGGCCAGTAAAGTAACAACTAAGGAGGGAGCTAAGATTGAGGATATCAGTCATATCAAAGATGGAGATCATGTCATTCTGTCTCTTGAGTAA 1059 0.4381 MPQLLKDSEERKDLLYAVDSDDNKLMRQLLKRGSDPNKVYYSNGWTPLVRRFVSFSSMTTALAYMDKNGHTPLFEAQSRGFKSVVKILKDHNRDPSTTNNVKSPNKLSGKPAAQSCQFLNASPGIKADAQARTLANPLAGTLTHAIGCEVVAKALANPSPNSIFGIVAKAEAKQFGRSFSGPASANRVKIVVSCPFQGDHHGSLMFLPDSIEELIQIGVEKIVVSCPQKGDHNGRVVWMPKSLEELINIGVDKYGFLASKVTTKEGVIIDNVSDIRDGDHVILARDRIVVSCPQKRDHHGRLVWLPESLEDLINMGVDKYGFLASKVTTKEGAKIEDISHIKDGDHVILSLE 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1980 352 Pfam KHA, dimerisation domain of potassium ion channel 221 282 IPR021789 -
Mibi08g1980 352 Pfam KHA, dimerisation domain of potassium ion channel 287 348 IPR021789 -
Mibi08g1980 352 MobiDBLite consensus disorder prediction 97 112 - -
Mibi08g1980 352 SMART ANK_2a 68 97 IPR002110 GO:0005515
Mibi08g1980 352 SMART ANK_2a 9 38 IPR002110 GO:0005515
Mibi08g1980 352 MobiDBLite consensus disorder prediction 91 112 - -
Mibi08g1980 352 ProSiteProfiles KHA domain profile. 287 352 IPR021789 -
Mibi08g1980 352 Pfam Ankyrin repeats (3 copies) 14 98 IPR002110 GO:0005515
Mibi08g1980 352 Gene3D - 4 107 IPR036770 -
Mibi08g1980 352 SUPERFAMILY Ankyrin repeat 6 101 IPR036770 -
Mibi08g1980 352 ProSiteProfiles Ankyrin repeat profile. 68 100 IPR002110 GO:0005515
Mibi08g1980 352 PANTHER POTASSIUM CHANNEL AKT1 9 284 IPR045319 GO:0005249|GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1980 Mibi-ChrMibi08 36937035 36938677 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1980 254 350 Ion Channels AT2G25600 32.990 2.74e-13 69.3