Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1979 ATGGGTAATTGCCTTGACACGGAATCCGAGGAAAGAAAGGATTTGCGTTCTGCTGTAGATAGAGATGATAATAAGTTAATGCGTCGGTTGCTGAAGAGGGGCTCAGATCCAAATGAAGTATATTTAATGGGAAGGACTCCACTGCATATTGCCGCACATAGATGCAACGAACGTGGTGTGGCTCTACTTCTCAAATATGGAGCTAATCCTCGTATAAAAGATATGGATGGAGAAACCCCGTTATTTAAAGCACAGATTGGAGGATTTAAATCGGTGATGAACCAGCCGCTCAAGACTGCAGATTTCGCAATGCTTCACCCTGGGACCTTGACGCACGCCAAATACTGTGCGCTTGTGGCTGAAGCTCTAGCCAACCCATCTCCCAATTCTATCTTTGGGATCGTGGCCGAAGCTGAAGCTAAACAATTTGGTCATTCTTTCTCTGGGTCCTCTTCTCCTAACCGTGTCAAGATAGTTGTGAGCTGTCCACACAAAGGAGACCATCAAGGGAGGCTGACGTATCTGCCCAAGTCCCTTAAGGAGCTGATTAACATAGGAGTGGAGAAGTACGACTTCTTGGCCAGCAAAATTACGACTATAGAAGGGGCTAAAATTGAGGATATTAGTCTGATCAAAGATGGAGATCATGTTGTTCTGGCACGTGACAAAATAGTTGTGAGTTGTCCACAAAAAGGAGACCATGATGGGAGGCTCGTATGGTCGCCCGAGTCCCTTGAAGAACTGATTAACATGGGAGTGAACATGTACGGCTTCTTGGCCAGCAAAGTTACAACTAGAGGGGGAGATAGGATTGAAGATGTCAGTCATATCAAAGATGGGGATCATATCATTCTGACTACTGAATAA 867 0.4521 MGNCLDTESEERKDLRSAVDRDDNKLMRRLLKRGSDPNEVYLMGRTPLHIAAHRCNERGVALLLKYGANPRIKDMDGETPLFKAQIGGFKSVMNQPLKTADFAMLHPGTLTHAKYCALVAEALANPSPNSIFGIVAEAEAKQFGHSFSGSSSPNRVKIVVSCPHKGDHQGRLTYLPKSLKELINIGVEKYDFLASKITTIEGAKIEDISLIKDGDHVVLARDKIVVSCPQKGDHDGRLVWSPESLEELINMGVNMYGFLASKVTTRGGDRIEDVSHIKDGDHIILTTE 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1979 288 SUPERFAMILY Ankyrin repeat 15 93 IPR036770 -
Mibi08g1979 288 Pfam Ankyrin repeats (3 copies) 18 84 IPR002110 GO:0005515
Mibi08g1979 288 SMART ANK_2a 43 72 IPR002110 GO:0005515
Mibi08g1979 288 SMART ANK_2a 10 39 IPR002110 GO:0005515
Mibi08g1979 288 Pfam KHA, dimerisation domain of potassium ion channel 223 285 IPR021789 -
Mibi08g1979 288 Pfam KHA, dimerisation domain of potassium ion channel 157 219 IPR021789 -
Mibi08g1979 288 ProSiteProfiles Ankyrin repeat region circular profile. 43 74 - -
Mibi08g1979 288 ProSiteProfiles Ankyrin repeat profile. 43 75 IPR002110 GO:0005515
Mibi08g1979 288 PANTHER POTASSIUM CHANNEL AKT1 10 100 IPR045319 GO:0005249|GO:0006813
Mibi08g1979 288 ProSiteProfiles KHA domain profile. 223 288 IPR021789 -
Mibi08g1979 288 Gene3D - 2 102 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1979 Mibi-ChrMibi08 36854193 36856362 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1979 14 93 Ion Channels AT2G26650 46.250 4.45e-14 70.5