Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1978 ATGGATTCTTCTCACACAACCGCCCCCACTACTGACGCTTCCCATTCCGTCACCGTACGCAGCGGCGGTAACGGCAGTTCTAGCGAGACTGCTACCATTAACCAAGGCGACCCTTCTCAGAGATCCGGTGACGAGATTCCCAAGGTTAAGAGTAGTGACCCCAAGAAGGAAGCTGTCGGGGAGGAACGAGCCAGCACTAGCGAGCACATCATTACTTTCCCTTCCAGCGAGATTACTGAGACTCCCAAGTCTCCGACAAAGGAGGCCGCGGAACAAGCCTCCACTCCTCATATGAGTAACCCGGAAGCTACTCCAATTAGTGACATTACCCAAGACACTGCTACTATCAACCAAGGCAACCCTTCTCAGAGTTCCGGTGAGCAAGCCACGACTCCTCATATGAGCATCCTGGAAGCTACTGCAATTAGTGGCATGACCGAAGACCAAGCCAACCCTTCTCAAAGATCCAGTGAGGGTCGTCTTTGTGACGATAACTTCTCCCTCATGTGTTCCGGCCTTTTTAAGTGGATGGCCATTAAGCAAATGGTGACTGGTGAGCAAGCCACCACTCCTTGTGCCCCGGAACCTATTCCACCTAGTGGCACTACCGGAGAGGGTGCTATTAGCAATGAACCCAACCCCGAGAATGATCGTTATGAGGTTACCTCGCTTATGTGTTCCGGTGGTCTTTTTAACCAGATGAGTGATACCCTGGAAGGCTTTTCTAACTGGATGACCAGCTCCCTGGAAGCTATTAGTTTCATCATAGATCCTTCCGGCATTCGTTACCGGCGCTGGGAGGCATTCTTGTTGATATTTATATTTTACACTGCACTGGTCATCCCATTTGAGGTGGCGTTCGTGGAGGAACCCAATGTTAGAGATGCTCTGCTGCGTGTTGACAAGGCTATCAGTGCCATATTTCTCATTGATTTGGTTATGAGTTTTTTTGTCAGCAAAGAGGACAAAAAAACTCAGCTATTGATTCAGAGTCATAGGAAGATTGCACGTAGCTACATTATATATTTCTGCTATAATGTCGTTGCTACCATCCCTTTGTGGTTTCAACAGTCATTATCACCATATCAACTGATCTCCATCCCCCTTCGCCTTCTTTCGGTTTTACGCCTTTGGAGGGCTGGTGCTATATTTCGCAGATGGGAGAGGAGGAGGACACTCGACTGTGTCGGGCTGAATTGGAAGTTGGACTATATATGGATCCGAGTATTGAAGCTGATTACTATATACACGTTGCATTTTGCGGCTTGCACGGTGTATTTTCTGACAGTACATTGTGACACTTCTTCCACATGGTTGACCGATTTGGATGATGCTGACGATGATTTGTGGGGGAGATATGTAGTTTCAGTATACTGGGCTTTCGCGACTCTAACAACCATTGGTTACGGGGATTTCCATCCTGAACGTGTCACCACAGATGATGATGGCATAGTAGATGTTAGTGTGGTAAGCTTGGCAGAGTTATGTGGAGACATGGGTGTGTTGTGTCACATACCACAACCCTCTACATTTCGAACCAAACAGCTGTGCCACTTCTTACGTCTAAGTCGTACTGCACTTGGGAGTATTGCTCGTTCAAATATTAAAGATGCAAGAACACTTATGAATAATTTCCTCCAGCTTTATAAGGATTCAAGTGAAAGGGATACAATAGTTCGGAAAGCTTTGGCAGAAGCCAGGGAGTCAATTGCTGGGGGCCTACATCTGACTGGTGAACATTTGTTGCGTGAGTTGCTGAGCAGGGGCTTATATCTATACGAAGATCTGAAGAGCAAAGCAGTAGCTAGTAAGTGA 1815 0.4711 MDSSHTTAPTTDASHSVTVRSGGNGSSSETATINQGDPSQRSGDEIPKVKSSDPKKEAVGEERASTSEHIITFPSSEITETPKSPTKEAAEQASTPHMSNPEATPISDITQDTATINQGNPSQSSGEQATTPHMSILEATAISGMTEDQANPSQRSSEGRLCDDNFSLMCSGLFKWMAIKQMVTGEQATTPCAPEPIPPSGTTGEGAISNEPNPENDRYEVTSLMCSGGLFNQMSDTLEGFSNWMTSSLEAISFIIDPSGIRYRRWEAFLLIFIFYTALVIPFEVAFVEEPNVRDALLRVDKAISAIFLIDLVMSFFVSKEDKKTQLLIQSHRKIARSYIIYFCYNVVATIPLWFQQSLSPYQLISIPLRLLSVLRLWRAGAIFRRWERRRTLDCVGLNWKLDYIWIRVLKLITIYTLHFAACTVYFLTVHCDTSSTWLTDLDDADDDLWGRYVVSVYWAFATLTTIGYGDFHPERVTTDDDGIVDVSVVSLAELCGDMGVLCHIPQPSTFRTKQLCHFLRLSRTALGSIARSNIKDARTLMNNFLQLYKDSSERDTIVRKALAEARESIAGGLHLTGEHLLRELLSRGLYLYEDLKSKAVASK 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1978 604 Pfam Ion transport protein 265 475 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mibi08g1978 604 MobiDBLite consensus disorder prediction 189 215 - -
Mibi08g1978 604 PANTHER POTASSIUM CHANNEL AKT1 487 556 IPR045319 GO:0005249|GO:0006813
Mibi08g1978 604 MobiDBLite consensus disorder prediction 43 64 - -
Mibi08g1978 604 PRINTS EAG/ELK/ERG potassium channel family signature 453 470 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi08g1978 604 PRINTS EAG/ELK/ERG potassium channel family signature 301 311 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi08g1978 604 PRINTS EAG/ELK/ERG potassium channel family signature 276 283 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mibi08g1978 604 SUPERFAMILY Voltage-gated potassium channels 257 478 - -
Mibi08g1978 604 MobiDBLite consensus disorder prediction 1 41 - -
Mibi08g1978 604 MobiDBLite consensus disorder prediction 68 106 - -
Mibi08g1978 604 MobiDBLite consensus disorder prediction 1 106 - -
Mibi08g1978 604 Gene3D - 263 496 - -
Mibi08g1978 604 SUPERFAMILY cAMP-binding domain-like 480 550 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1978 Mibi-ChrMibi08 36816736 36821288 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1978 480 548 Ion Channels AT4G18290 40.000 3.07e-09 58.2