Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1975 ATGGTAGAAGAAATATATCTACACTTCTTGCCTAACAGGAATTTTGAGACAGGAACGTGGCCACAATCTGACGCAGAATATTCATGTGAAGCTGGCCCCTCTTCCCTCCATTTTAAGCATTCCGAGACGGATCAGGCCGCCATAAGTCCTCCGCCTTCAAGCAGTGAAAAATCCTCCTCCTCTGCTCTTCACCTCGAAGTTAAACGAGGACCGGAGAGCGATGAGGAGATCAGAAGGGTGCCGGAGTTGGGCGGCGAATCCGCCGGAATTTCAGCTTCCCGGCCGGAAACCGCCGTGGGAGGAGTTCAGGGGAGAGGAGGGAGTCAGAGGAAGAGAGGCAGAAACGCTGCGGACAAAGAAACCAAGCGCCTCAAGAGGTTGCTGAGGAACAGAGTTTCTGCTCAGCAAGCAAGAGAGAGGAAGAAGGCATACTTGACTGATTTGGAAATGAGGGTTAAAGACTTGGAGAAGAAGAATACGGAGGTGGAAGAGAGGTTATCCACTCTGCAGAACGAGAATCAGATGCTAAGACAAATACTGAAGAACACAACTGCAGGCAGAAGAGGAGGCAGTGGTGGTGTAAATGAGGGAACTTTATGA 600 0.5033 MVEEIYLHFLPNRNFETGTWPQSDAEYSCEAGPSSLHFKHSETDQAAISPPPSSSEKSSSSALHLEVKRGPESDEEIRRVPELGGESAGISASRPETAVGGVQGRGGSQRKRGRNAADKETKRLKRLLRNRVSAQQARERKKAYLTDLEMRVKDLEKKNTEVEERLSTLQNENQMLRQILKNTTAGRRGGSGGVNEGTL 199
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1975 199 Pfam bZIP transcription factor 119 180 IPR004827 GO:0003700|GO:0006355
Mibi08g1975 199 FunFam Transcription factor HY5 141 182 - -
Mibi08g1975 199 MobiDBLite consensus disorder prediction 25 123 - -
Mibi08g1975 199 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 45 191 IPR044280 GO:0000981|GO:0045944
Mibi08g1975 199 SUPERFAMILY Leucine zipper domain 122 180 IPR046347 GO:0003700|GO:0006355
Mibi08g1975 199 MobiDBLite consensus disorder prediction 67 82 - -
Mibi08g1975 199 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 120 183 IPR004827 GO:0003700|GO:0006355
Mibi08g1975 199 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 125 140 IPR004827 GO:0003700|GO:0006355
Mibi08g1975 199 Coils Coil 117 179 - -
Mibi08g1975 199 MobiDBLite consensus disorder prediction 38 61 - -
Mibi08g1975 199 CDD bZIP_HY5-like 123 174 - -
Mibi08g1975 199 Gene3D Single helix bin 141 182 - -
Mibi08g1975 199 SMART brlzneu 118 182 IPR004827 GO:0003700|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mibi08g1975 Mibi-ChrMibi08 36726371 36729544 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g1975 62 179 bZIP Transcription Factor Family AT5G11260 69.919 7.81e-49 155
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mibi08g1975 bZIP_1 1.8e-13 CL0018